RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 MATR3P43243 847 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDHR4-203ENST00000460430 RBL2Q08999 1139 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 NCBP1Q09161 790 aaKnown RBP11.74□□□□□ -0.53
CDHR4-203ENST00000460430 MGAT3Q09327 533 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 KCNA1Q09470 495 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 PAK2Q13177 524 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 PCBP1Q15365 356 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDHR4-203ENST00000460430 KNOP1Q1ED39 458 aaKnown RBP11.74□□□□□ -0.53
CDHR4-203ENST00000460430 UBE2Q1Q7Z7E8 422 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 GOLGA5Q8TBA6 731 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 ZNF507Q8TCN5 953 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 P2RX5Q93086 422 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 HTATIP2Q9BUP3 242 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 NOC4LQ9BVI4 516 aaKnown RBP11.74□□□□□ -0.53
CDHR4-203ENST00000460430 CCDC113Q9H0I3 377 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 GBP3Q9H0R5 595 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 MINDY3Q9H8M7 445 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 TYW1Q9NV66 732 aaKnown RBP11.74□□□□□ -0.53
CDHR4-203ENST00000460430 ANKFY1Q9P2R3 1169 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 CNTNAP2Q9UHC6 1331 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 ZMYM2Q9UBW7 1377 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 SIP14410 1827 aa11.74□□□□□ -0.53
CDHR4-203ENST00000460430 TSPAN1O60635 241 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 CAVIN2O95810 425 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 FGFR4P22455 802 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 CCNE1P24864 410 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 STX17P56962 302 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 LRRC63Q05C16 580 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 KIAA0100Q14667 2235 aaKnown RBP11.73□□□□□ -0.53
CDHR4-203ENST00000460430 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
CDHR4-203ENST00000460430 CT47A1Q5JQC4 288 aaPredicted RBP11.73□□□□□ -0.53
CDHR4-203ENST00000460430 FAM26DQ5JW98 314 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 TSHZ1Q6ZSZ6 1077 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 TAS1R3Q7RTX0 852 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 TMEM40Q8WWA1 233 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 STRA6Q9BX79 667 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 CDHR5Q9HBB8 845 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 PRKAG2Q9UGJ0 569 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 RWDD2AQ9UIY3 292 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 TBX21Q9UL17 535 aa11.73□□□□□ -0.53
CDHR4-203ENST00000460430 PIN4Q9Y237 131 aaKnown RBP11.73□□□□□ -0.53
CDHR4-203ENST00000460430 TANC1Q9C0D5 1861 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 UMODL1Q5DID0 1318 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 TRIM49BA6NDI0 452 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 BECN2A8MW95 431 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 ACKR2O00590 384 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 GPR182O15218 404 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 B4GALT5O43286 388 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 HARSP12081 509 aaKnown RBP11.72□□□□□ -0.53
CDHR4-203ENST00000460430 ERCC5P28715 1186 aaPredicted RBP11.72□□□□□ -0.53
CDHR4-203ENST00000460430 ZNF165P49910 485 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 NFX1Q12986 1120 aaKnown RBP11.72□□□□□ -0.53
CDHR4-203ENST00000460430 FAM187BQ17R55 369 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 FBXO47Q5MNV8 452 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 ATF7IP2Q5U623 682 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 NOTUMQ6P988 496 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 APBB1IPQ7Z5R6 666 aaPredicted RBP11.72□□□□□ -0.53
CDHR4-203ENST00000460430 FAM228AQ86W67 206 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 C7orf61Q8IZ16 206 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 NOC3LQ8WTT2 800 aaKnown RBP11.72□□□□□ -0.53
CDHR4-203ENST00000460430 KCNN1Q92952 543 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 ADPGKQ9BRR6 497 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 TCHPQ9BT92 498 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 TARS2Q9BW92 718 aaKnown RBP11.72□□□□□ -0.53
CDHR4-203ENST00000460430 FZD8Q9H461 694 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 AGPAT3Q9NRZ7 376 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 AGPAT5Q9NUQ2 364 aa11.72□□□□□ -0.53
CDHR4-203ENST00000460430 CGNQ9P2M7 1197 aaKnown RBP11.72□□□□□ -0.53
CDHR4-203ENST00000460430 NOC2LQ9Y3T9 749 aaKnown RBP11.72□□□□□ -0.53
CDHR4-203ENST00000460430 PDXKO00764 312 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 N4BP3O15049 544 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 TOM1L1O75674 476 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 PARNO95453 639 aaKnown RBP11.71□□□□□ -0.53
CDHR4-203ENST00000460430 PIGRP01833 764 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 IQCF3P0C7M6 154 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 RAG1P15918 1043 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 RPL13P26373 211 aaKnown RBP11.71□□□□□ -0.53
CDHR4-203ENST00000460430 CD52P31358 61 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 CYP2C18P33260 490 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 HOXD13P35453 343 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 CCL23P55773 120 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 SNRPFP62306 86 aaKnown RBP11.71□□□□□ -0.53
CDHR4-203ENST00000460430 TPM4P67936 248 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 MYL5Q02045 173 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 LPIN1Q14693 890 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 EDRF1Q3B7T1 1238 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 ZNF568Q3ZCX4 644 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 SLFN12LQ6IEE8 588 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 ZPBP2Q6X784 338 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 AOPEPQ8N6M6 819 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 FAM200AQ8TCP9 573 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 POMGNT1Q8WZA1 660 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 CPB2Q96IY4 423 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 BPIFA3Q9BQP9 254 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 MSTO1Q9BUK6 570 aa11.71□□□□□ -0.53
CDHR4-203ENST00000460430 TRIM6Q9C030 488 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms