RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 STARD3Q14849 445 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 ZNF667Q5HYK9 610 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 GET4Q7L5D6 327 aaPredicted RBP10.76□□□□□ -0.69
EPB41-208ENST00000460378 RNF214Q8ND24 703 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
EPB41-208ENST00000460378 DYRK4Q9NR20 520 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 USP18Q9UMW8 372 aa10.76□□□□□ -0.69
EPB41-208ENST00000460378 UBR3Q6ZT12 1888 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 SLC16A4O15374 487 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 N4BP1O75113 896 aaKnown RBP10.75□□□□□ -0.69
EPB41-208ENST00000460378 CYP27A1Q02318 531 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 SHROOM1Q2M3G4 852 aaPredicted RBP10.75□□□□□ -0.69
EPB41-208ENST00000460378 BCO2Q9BYV7 579 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 STK17AQ9UEE5 414 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 B4GALT4O60513 344 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 FGF19O95750 216 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 SNAI1O95863 264 aaPredicted RBP10.75□□□□□ -0.69
EPB41-208ENST00000460378 CKMP06732 381 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 PNPLA4P41247 253 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 CCDC173Q0VFZ6 552 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 PTCRAQ6ISU1 281 aaPredicted RBP10.75□□□□□ -0.69
EPB41-208ENST00000460378 RYBPQ8N488 228 aaPredicted RBP10.75□□□□□ -0.69
EPB41-208ENST00000460378 BACH2Q9BYV9 841 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 DNAJC18Q9H819 358 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 IL17RBQ9NRM6 502 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 GJD2Q9UKL4 321 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 TDP2O95551 362 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 ARP10275 920 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 GSPT1P15170 499 aaKnown RBP10.75□□□□□ -0.69
EPB41-208ENST00000460378 CCDC70Q6NSX1 233 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 CD302Q8IX05 232 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 NFASCO94856 1347 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 TNRC6CQ9HCJ0 1690 aaKnown RBP10.75□□□□□ -0.69
EPB41-208ENST00000460378 PLA2G4FQ68DD2 849 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 STOX1Q6ZVD7 989 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 TTC39CQ8N584 583 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 PRRX2Q99811 253 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 ASAH2Q9NR71 780 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 CPSF3Q9UKF6 684 aaKnown RBP10.75□□□□□ -0.69
EPB41-208ENST00000460378 PAXBP1Q9Y5B6 917 aa10.75□□□□□ -0.69
EPB41-208ENST00000460378 MMP1P03956 469 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 CKBP12277 381 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.74□□□□□ -0.69
EPB41-208ENST00000460378 SCFD1Q8WVM8 642 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 TRAPPC12Q8WVT3 735 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 UROC1Q96N76 676 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 ATXN3LQ9H3M9 355 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 PAK6Q9NQU5 681 aaPredicted RBP10.74□□□□□ -0.69
EPB41-208ENST00000460378 CUTAO60888 179 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 TMEM132DQ14C87 1099 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 IL31Q6EBC2 164 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 LMBR1Q8WVP7 490 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 TNIP3Q96KP6 325 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 CDCA3Q99618 268 aaPredicted RBP10.74□□□□□ -0.69
EPB41-208ENST00000460378 UXTQ9UBK9 157 aaPredicted RBP10.74□□□□□ -0.69
EPB41-208ENST00000460378 ZNF865P0CJ78 1059 aaPredicted RBP10.74□□□□□ -0.69
EPB41-208ENST00000460378 TUFMP49411 452 aaKnown RBP10.74□□□□□ -0.69
EPB41-208ENST00000460378 FAM26FQ5R3K3 315 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 SLC27A1Q6PCB7 646 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
EPB41-208ENST00000460378 SCN4AP35499 1836 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 SMTNL1A8MU46 457 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 CTNNA2P26232 953 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 PRR23BQ6ZRT6 265 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 ANKS3Q6ZW76 656 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 NOC4LQ9BVI4 516 aaKnown RBP10.74□□□□□ -0.69
EPB41-208ENST00000460378 MAGEF1Q9HAY2 307 aa10.74□□□□□ -0.69
EPB41-208ENST00000460378 KIAA0355O15063 1070 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 KIAA0391O15091 583 aaKnown RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 NFE2Q16621 373 aaPredicted RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 CUEDC2Q9H467 287 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 TMEM161AQ9NX61 479 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 IPO11Q9UI26 975 aaKnown RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 PCDHA2Q9Y5H9 948 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 COL2A1P02458 1487 aaPredicted RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 LETM1O95202 739 aaPredicted RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 CLTAP09496 248 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 SARSP49591 514 aaKnown RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 BCAR1P56945 870 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 GDF6Q6KF10 455 aaPredicted RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 MRPS27Q92552 414 aaKnown RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 STK36Q9NRP7 1315 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 A6NJR5 290 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 ACADMP11310 421 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 RBP5P82980 135 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 MOXD1Q6UVY6 613 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 TRPM5Q9NZQ8 1165 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 LY75O60449 1722 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 MYH14Q7Z406 1995 aaKnown RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 EOMESO95936 686 aa10.73□□□□□ -0.69
EPB41-208ENST00000460378 CST5P28325 142 aaPredicted RBP10.73□□□□□ -0.69
EPB41-208ENST00000460378 MYMKA6NI61 221 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 MAP3K10Q02779 954 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 BYSLQ13895 437 aaKnown RBP10.72□□□□□ -0.69
EPB41-208ENST00000460378 TDRD10Q5VZ19 366 aaKnown RBP10.72□□□□□ -0.69
EPB41-208ENST00000460378 DDX53Q86TM3 631 aaKnown RBP10.72□□□□□ -0.69
EPB41-208ENST00000460378 IGDCC4Q8TDY8 1250 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 CPLX3Q8WVH0 158 aa10.72□□□□□ -0.69
EPB41-208ENST00000460378 PBXIP1Q96AQ6 731 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms