RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 K7ENM7 598 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 CSDE1O75534 798 aaKnown RBP11.28□□□□□ -0.6
GARNL3-211ENST00000460176 RPS6KA5O75582 802 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
GARNL3-211ENST00000460176 CXCL10P02778 98 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 EDN1P05305 212 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 CSF2RAP15509 400 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 FGFR4P22455 802 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 RFC2P35250 354 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 EFNA5P52803 228 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 SMTNP53814 917 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 GTF2BQ00403 316 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 STK4Q13043 487 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 AMHR2Q16671 573 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-211ENST00000460176 PLEKHG4Q58EX7 1191 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 RBM43Q6ZSC3 357 aaKnown RBP11.28□□□□□ -0.6
GARNL3-211ENST00000460176 ZNF720Q7Z2F6 126 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 ZBTB8OSQ8IWT0 167 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 KIAA0895Q8NCT3 520 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 TET1Q8NFU7 2136 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 BADQ92934 168 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 GSDMAQ96QA5 445 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-211ENST00000460176 TMEM134Q9H6X4 195 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 MRPL44Q9H9J2 332 aaKnown RBP11.28□□□□□ -0.6
GARNL3-211ENST00000460176 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 MAN1B1Q9UKM7 699 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 ST3GAL5Q9UNP4 418 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 MICAL3Q7RTP6 2002 aa11.28□□□□□ -0.6
GARNL3-211ENST00000460176 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 H0YCG3 227 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 K7ERI5 159 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 B4GALT5O43286 388 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 TSPAN1O60635 241 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 GCNT3O95395 438 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 PRKCBP05771 671 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 SCP2P22307 547 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 CD52P31358 61 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 PAK2Q13177 524 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 PSMD2Q13200 908 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 MAPK6Q16659 721 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 TCTN1Q2MV58 587 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-211ENST00000460176 CAVIN1Q6NZI2 390 aaKnown RBP11.27□□□□□ -0.61
GARNL3-211ENST00000460176 SLC17A8Q8NDX2 589 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 CCDC47Q96A33 483 aaKnown RBP11.27□□□□□ -0.61
GARNL3-211ENST00000460176 HVCN1Q96D96 273 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 SLC39A2Q9NP94 309 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 RMND1Q9NWS8 449 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 PADI3Q9ULW8 664 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 TBX20Q9UMR3 447 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 GDAQ9Y2T3 454 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 NR2E3Q9Y5X4 410 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 PTPRSQ13332 1948 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 ZMYM2Q9UBW7 1377 aa11.27□□□□□ -0.61
GARNL3-211ENST00000460176 GPR182O15218 404 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 EIF3DO15371 548 aaKnown RBP eCLIP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 ERLIN2O94905 339 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 BMP6P22004 513 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 SFPQP23246 707 aaKnown RBP eCLIP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 ABCD1P33897 745 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 HOXD13P35453 343 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 KCNA1Q09470 495 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 NFX1Q12986 1120 aaKnown RBP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 ALCAMQ13740 583 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 MORC3Q14149 939 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 PCBP1Q15365 356 aaKnown RBP eCLIP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 ZNF658Q5TYW1 1059 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 CATSPER4Q7RTX7 472 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 DEFB128Q7Z7B8 93 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 MAP4K3Q8IVH8 894 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 DBF4BQ8NFT6 615 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 ZNF507Q8TCN5 953 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 SCFD1Q8WVM8 642 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 IFIH1Q9BYX4 1025 aaKnown RBP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 IKZF4Q9H2S9 585 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 TMX1Q9H3N1 280 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 IL23AQ9NPF7 189 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 AGPAT5Q9NUQ2 364 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 PRMT7Q9NVM4 692 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-211ENST00000460176 USP20Q9Y2K6 914 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 UBE4BO95155 1302 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 CNTNAP2Q9UHC6 1331 aa11.26□□□□□ -0.61
GARNL3-211ENST00000460176 BIN1O00499 593 aa11.25□□□□□ -0.61
GARNL3-211ENST00000460176 ACKR2O00590 384 aa11.25□□□□□ -0.61
GARNL3-211ENST00000460176 PIGRP01833 764 aa11.25□□□□□ -0.61
GARNL3-211ENST00000460176 PFKMP08237 780 aa11.25□□□□□ -0.61
GARNL3-211ENST00000460176 ARF4P18085 180 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-211ENST00000460176 HOXA11P31270 313 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-211ENST00000460176 EPHB4P54760 987 aa11.25□□□□□ -0.61
GARNL3-211ENST00000460176 FPGSQ05932 587 aa11.25□□□□□ -0.61
GARNL3-211ENST00000460176 STRN3Q13033 797 aa11.25□□□□□ -0.61
GARNL3-211ENST00000460176 PPIGQ13427 754 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms