RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 XXYLT1Q8NBI6 393 aa19.62■□□□□ 0.73
HPS3-202ENST00000460120 KRT35Q92764 455 aa19.62■□□□□ 0.73
HPS3-202ENST00000460120 RMDN3Q96TC7 470 aa19.62■□□□□ 0.73
HPS3-202ENST00000460120 LRRC4CQ9HCJ2 640 aa19.62■□□□□ 0.73
HPS3-202ENST00000460120 SYNPO2Q9UMS6 1093 aa19.62■□□□□ 0.73
HPS3-202ENST00000460120 EIF3HO15372 352 aaKnown RBP eCLIP19.61■□□□□ 0.73
HPS3-202ENST00000460120 SHOX2O60902 331 aaPredicted RBP19.61■□□□□ 0.73
HPS3-202ENST00000460120 CLSTN1O94985 981 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 UAP1Q16222 522 aaPredicted RBP19.61■□□□□ 0.73
HPS3-202ENST00000460120 KCND2Q9NZV8 630 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 ZNRF3Q9ULT6 936 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 ATAD5Q96QE3 1844 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 A0A0A6YYK5 440 aaPredicted RBP19.61■□□□□ 0.73
HPS3-202ENST00000460120 DDX3YO15523 660 aaKnown RBP19.61■□□□□ 0.73
HPS3-202ENST00000460120 CCNE2O96020 404 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 MXI1P50539 228 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 C1orf220Q5T0J3 134 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 INTS8Q75QN2 995 aaKnown RBP19.61■□□□□ 0.73
HPS3-202ENST00000460120 SLC47A2Q86VL8 602 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 STRA6Q9BX79 667 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 MYOZ2Q9NPC6 264 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 UBE4BO95155 1302 aa19.61■□□□□ 0.73
HPS3-202ENST00000460120 NR1D1P20393 614 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 CETN1Q12798 172 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 PGM5Q15124 567 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 ARHGEF16Q5VV41 709 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 DHX38Q92620 1227 aaKnown RBP19.6■□□□□ 0.73
HPS3-202ENST00000460120 SYT11Q9BT88 431 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 TMEM117Q9H0C3 514 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 RIPK3Q9Y572 518 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 DLATP10515 647 aaKnown RBP19.6■□□□□ 0.73
HPS3-202ENST00000460120 NFIL3Q16649 462 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 EPC2Q52LR7 807 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 PCDHB18PQ96TA0 734 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 TMEM206Q9H813 350 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 ATP8A1Q9Y2Q0 1164 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 ALG6Q9Y672 507 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 GOLGA6L10A6NI86 522 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 CCDC172P0C7W6 258 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 SEMA4DQ92854 862 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 RPAP3Q9H6T3 665 aaPredicted RBP19.6■□□□□ 0.73
HPS3-202ENST00000460120 INTUQ9ULD6 942 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 UTP11Q9Y3A2 253 aaKnown RBP19.6■□□□□ 0.73
HPS3-202ENST00000460120 UBIAD1Q9Y5Z9 338 aa19.6■□□□□ 0.73
HPS3-202ENST00000460120 COL2A1P02458 1487 aaPredicted RBP19.59■□□□□ 0.73
HPS3-202ENST00000460120 CES2O00748 559 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 MMEP08473 750 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 RXRBP28702 533 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 HSPA9P38646 679 aaKnown RBP19.59■□□□□ 0.73
HPS3-202ENST00000460120 SEC24CP53992 1094 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 PPATQ06203 517 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 DHX9Q08211 1270 aaKnown RBP19.59■□□□□ 0.73
HPS3-202ENST00000460120 LMBRD2Q68DH5 695 aaPredicted RBP19.59■□□□□ 0.73
HPS3-202ENST00000460120 SAMD7Q7Z3H4 446 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 NOP9Q86U38 636 aaKnown RBP19.59■□□□□ 0.73
HPS3-202ENST00000460120 KCTD17Q8N5Z5 321 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 CCDC26Q8TAB7 109 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 ATG4CQ96DT6 458 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 PI4K2AQ9BTU6 479 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 RASSF4Q9H2L5 321 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 NCANO14594 1321 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 ANKRD62A6NC57 917 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 PHF20L1A8MW92 1017 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 NDUFAB1O14561 156 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 VCAM1P19320 739 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 ANXA13P27216 316 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 KIF22Q14807 665 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 ODF2Q5BJF6 829 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 PCNX4Q63HM2 1172 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 RNF207Q6ZRF8 634 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 MCF2L2Q86YR7 1114 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 RASGEF1CQ8N431 466 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 UHMK1Q8TAS1 419 aaKnown RBP19.59■□□□□ 0.73
HPS3-202ENST00000460120 ATP6V1G3Q96LB4 118 aa19.59■□□□□ 0.73
HPS3-202ENST00000460120 SMIM23A6NLE4 172 aa19.58■□□□□ 0.73
HPS3-202ENST00000460120 CUL1Q13616 776 aa19.58■□□□□ 0.73
HPS3-202ENST00000460120 BAATQ14032 418 aaPredicted RBP19.58■□□□□ 0.73
HPS3-202ENST00000460120 C18orf8Q96DM3 657 aa19.58■□□□□ 0.73
HPS3-202ENST00000460120 CALR3Q96L12 384 aaKnown RBP19.58■□□□□ 0.73
HPS3-202ENST00000460120 SNX24Q9Y343 169 aa19.58■□□□□ 0.73
HPS3-202ENST00000460120 RPTORQ8N122 1335 aa19.58■□□□□ 0.73
HPS3-202ENST00000460120 DENND3A2RUS2 1198 aa19.58■□□□□ 0.72
HPS3-202ENST00000460120 CCDC188H7C350 402 aa19.58■□□□□ 0.72
HPS3-202ENST00000460120 TBC1D12O60347 775 aa19.58■□□□□ 0.72
HPS3-202ENST00000460120 ADSSP30520 456 aa19.58■□□□□ 0.72
HPS3-202ENST00000460120 SSTR3P32745 418 aaPredicted RBP19.58■□□□□ 0.72
HPS3-202ENST00000460120 DR1Q01658 176 aa19.58■□□□□ 0.72
HPS3-202ENST00000460120 SNRNP35Q16560 246 aaKnown RBP19.58■□□□□ 0.72
HPS3-202ENST00000460120 ZNF772Q68DY9 489 aaPredicted RBP19.58■□□□□ 0.72
HPS3-202ENST00000460120 SLC9A9Q8IVB4 645 aa19.58■□□□□ 0.72
HPS3-202ENST00000460120 KREMEN1Q96MU8 473 aa19.58■□□□□ 0.72
HPS3-202ENST00000460120 MYH11P35749 1972 aa19.57■□□□□ 0.72
HPS3-202ENST00000460120 MYZAPP0CAP1 466 aa19.57■□□□□ 0.72
HPS3-202ENST00000460120 KCNA3P22001 575 aa19.57■□□□□ 0.72
HPS3-202ENST00000460120 C2CD6Q53TS8 623 aa19.57■□□□□ 0.72
HPS3-202ENST00000460120 FAM83AQ86UY5 434 aa19.57■□□□□ 0.72
HPS3-202ENST00000460120 NEK9Q8TD19 979 aa19.57■□□□□ 0.72
HPS3-202ENST00000460120 BSNDQ8WZ55 320 aa19.57■□□□□ 0.72
HPS3-202ENST00000460120 SLC38A10Q9HBR0 1119 aa19.57■□□□□ 0.72
HPS3-202ENST00000460120 PPANQ9NQ55 473 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms