RNA–Protein interactions for RNA: ENST00000458716.2

ZFHX4-201, Transcript of zinc finger homeobox 4, humanhuman

TSL 2

Gene ZFHX4, Length 3,612 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4-201ENST00000458716 NT5C2P49902 561 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 MMP14P50281 582 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 NCALDP61601 193 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 SPIRE1Q08AE8 756 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 TCP10Q12799 353 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 PHLDB2Q86SQ0 1253 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 SLFN12Q8IYM2 578 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 C1orf54Q8WWF1 131 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 PAIP2Q9BPZ3 127 aaKnown RBP9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 TISP43B9A030 160 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 SPOPO43791 374 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 SNX3O60493 162 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 NQO1P15559 274 aaKnown RBP9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 HOXA7P31268 230 aaPredicted RBP9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 MYL7Q01449 175 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 DHX34Q14147 1143 aaKnown RBP9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 ITIH4Q14624 930 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 PHLDB3Q6NSJ2 640 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 SYCP3Q8IZU3 236 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 RPGRQ92834 1020 aaKnown RBP9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 KAT5Q92993 513 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 GPR88Q9GZN0 384 aa9.32□□□□□ -0.92
ZFHX4-201ENST00000458716 NCANO14594 1321 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 MYO3BQ8WXR4 1341 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 ANKRD62A6NC57 917 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 MEIS2O14770 477 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 EXOC3O60645 756 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 KRT16P08779 473 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 RARAP10276 462 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 DLATP10515 647 aaKnown RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 SEL1L2Q5TEA6 688 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 RINT1Q6NUQ1 792 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 UBL4BQ8N7F7 174 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 ETNPPLQ8TBG4 499 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 EIF2AK1Q9BQI3 630 aaKnown RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 FAM167BQ9BTA0 163 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 TTC7AQ9ULT0 858 aaPredicted RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 BTAF1O14981 1849 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 PFASO15067 1338 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 SPATA31A1Q5TZJ5 1347 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 MSH4O15457 936 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 PDE6CP51160 858 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 DLG4P78352 724 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 FAM47EQ6ZV65 393 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 ERICH1Q86X53 443 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 COL23A1Q86Y22 540 aaPredicted RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 RPUSD2Q8IZ73 545 aaKnown RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 MAGEC3Q8TD91 643 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 AGPAT1Q99943 283 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 FAM118BQ9BPY3 351 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 CDC42EP4Q9H3Q1 356 aaKnown RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 APEX2Q9UBZ4 518 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 ASIC3Q9UHC3 531 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 GGA1Q9UJY5 639 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 FRMD4BQ9Y2L6 1034 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 C15orf41Q9Y2V0 281 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 USP15Q9Y4E8 981 aaPredicted RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 LY75O60449 1722 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 NHSQ6T4R5 1651 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 AFF2P51816 1311 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 LTBP1Q14766 1721 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 CHRNA3P32297 505 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 SHMT1P34896 483 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 CALCOCO2Q13137 446 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 CRYMQ14894 314 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 FAM98CQ17RN3 349 aaKnown RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 GPATCH4Q5T3I0 446 aaKnown RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 NAIF1Q69YI7 327 aaPredicted RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 TAOK1Q7L7X3 1001 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 HS2ST1Q7LGA3 356 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 MICAL1Q8TDZ2 1067 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 DYDC2Q96IM9 177 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 FAXDC2Q96IV6 333 aa9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 TRIM6Q9C030 488 aaPredicted RBP9.31□□□□□ -0.92
ZFHX4-201ENST00000458716 SLC16A3O15427 465 aaKnown RBP9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 CHKAP35790 457 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 GCLMP48507 274 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 GABPAQ06546 454 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 KYNUQ16719 465 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 SLFN13Q68D06 897 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 ZFPM1Q8IX07 1006 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 FAM178BQ8IXR5 827 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 CNBD1Q8NA66 436 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 SLC17A8Q8NDX2 589 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 ATG4AQ8WYN0 398 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 ZSWIM1Q9BR11 485 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 SH2D3AQ9BRG2 576 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 ADAM33Q9BZ11 813 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 HOMER3Q9NSC5 361 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 PKD2L1Q9P0L9 805 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 SYNGAP1Q96PV0 1343 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 CLDN3O15551 220 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 CALCAP01258 141 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 GSTA1P08263 222 aa9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 EEF2P13639 858 aaKnown RBP9.3□□□□□ -0.92
ZFHX4-201ENST00000458716 NOVP48745 357 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms