RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 KCNMB3Q9NPA1 279 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 KANSL3Q9P2N6 904 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 VAV3Q9UKW4 847 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 COL4A3BPQ9Y5P4 624 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 DDX11L8A8MPP1 907 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 INPPL1O15357 1258 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 DKC1O60832 514 aaKnown RBP eCLIP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 DEXIO95424 95 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 PAPLNO95428 1278 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 CNPP09543 421 aaKnown RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 HOXA11P31270 313 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 QARSP47897 775 aaKnown RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 CCT2P78371 535 aaKnown RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 FOXK2Q01167 660 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 SSRP1Q08945 709 aaKnown RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 TOB2Q14106 344 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 NONOQ15233 471 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■■■■ 33.1
HDLBP-227ENST00000458564 LONRF3Q496Y0 759 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 PLA2G4FQ68DD2 849 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 FEZF2Q8TBJ5 459 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 PSPC1Q8WXF1 523 aaKnown RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 FAM20AQ96MK3 541 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 KLHL5Q96PQ7 755 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 MFSD1Q9H3U5 465 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 RSAD1Q9HA92 442 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 DDX25Q9UHL0 483 aaKnown RBP11.68□□□□□ -0.54
HDLBP-227ENST00000458564 DUSP12Q9UNI6 340 aa11.68□□□□□ -0.54
HDLBP-227ENST00000458564 EML1O00423 815 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 EPB41L2O43491 1005 aaKnown RBP11.67□□□□□ -0.54
HDLBP-227ENST00000458564 SLC37A4O43826 429 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 DDHD2O94830 711 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 REC8O95072 547 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 EFEMP2O95967 443 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 SOD2P04179 222 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 P4HBP07237 508 aaKnown RBP11.67□□□□□ -0.54
HDLBP-227ENST00000458564 GCFC2P16383 781 aaKnown RBP11.67□□□□□ -0.54
HDLBP-227ENST00000458564 NCLP19338 710 aaKnown RBP11.67□□□□□ -0.54
HDLBP-227ENST00000458564 AOC1P19801 751 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 RFC5P40937 340 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 NPEPPSP55786 919 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 TDGQ13569 410 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 PCBP1Q15365 356 aaKnown RBP eCLIP11.67□□□□□ -0.54
HDLBP-227ENST00000458564 LETM2Q2VYF4 491 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 UBXN11Q5T124 520 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 PPP4R3AQ6IN85 833 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 CYP26C1Q6V0L0 522 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 RUFY3Q7L099 469 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 KRT25Q7Z3Z0 450 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 RNF168Q8IYW5 571 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-227ENST00000458564 ZNF274Q96GC6 653 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-227ENST00000458564 GBP3Q9H0R5 595 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 MINDY3Q9H8M7 445 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 UBN1Q9NPG3 1134 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 MRPL17Q9NRX2 175 aaKnown RBP11.67□□□□□ -0.54
HDLBP-227ENST00000458564 IGSF9Q9P2J2 1179 aa11.67□□□□□ -0.54
HDLBP-227ENST00000458564 NRP1O14786 923 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 TBX3O15119 743 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 C1RP00736 705 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 ALDH2P05091 517 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 URODP06132 367 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 NPR3P17342 541 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 KLRC2P26717 231 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 AFF1P51825 1210 aaKnown RBP11.66□□□□□ -0.54
HDLBP-227ENST00000458564 DSC1Q08554 894 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 LAMTOR4Q0VGL1 99 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 INF2Q27J81 1249 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 C4orf19Q8IY42 314 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 CCDC105Q8IYK2 499 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 CNNM3Q8NE01 707 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 PRPF31Q8WWY3 499 aaKnown RBP11.66□□□□□ -0.54
HDLBP-227ENST00000458564 CCDC51Q96ER9 411 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 CEP170P1Q96L14 293 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 RPS6KC1Q96S38 1066 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 HERC2P3Q9BVR0 1158 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 KCNK12Q9HB15 430 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 MARCH5Q9NX47 278 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 WRAP73Q9P2S5 460 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-227ENST00000458564 DPP7Q9UHL4 492 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 SSX2IPQ9Y2D8 614 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 FAN1Q9Y2M0 1017 aa11.66□□□□□ -0.54
HDLBP-227ENST00000458564 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 CPLX1O14810 134 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 ASAP2O43150 1006 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 N4BP1O75113 896 aaKnown RBP11.65□□□□□ -0.54
HDLBP-227ENST00000458564 ADH1AP07327 375 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 AXLP30530 894 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
HDLBP-227ENST00000458564 EMC2Q15006 297 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 ELMSAN1Q6PJG2 1045 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 CPLX2Q6PUV4 134 aaKnown RBP11.65□□□□□ -0.54
HDLBP-227ENST00000458564 NEK8Q86SG6 692 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 FERMT3Q86UX7 667 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 COLGALT2Q8IYK4 626 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 GPR65Q8IYL9 337 aa11.65□□□□□ -0.54
HDLBP-227ENST00000458564 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
HDLBP-227ENST00000458564 SMG8Q8ND04 991 aaKnown RBP11.65□□□□□ -0.54
HDLBP-227ENST00000458564 TCP11Q8WWU5 503 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms