RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 POF1BQ8WVV4 589 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 KIFAP3Q92845 792 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 AK8Q96MA6 479 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 USP28Q96RU2 1077 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 C2orf40Q9H1Z8 148 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 CWH43Q9H720 699 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 LMCD1Q9NZU5 365 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 PLAGL2Q9UPG8 496 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 HES2Q9Y543 173 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 TRANK1O15050 2925 aa20.65■□□□□ 0.9
USP39-209ENST00000458268 SFI1A8K8P3 1242 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 NT5C1B-RDH14C9J2C7 533 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 PLA2G4BP0C869 781 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 AXLP30530 894 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 LONP1P36776 959 aaKnown RBP20.64■□□□□ 0.89
USP39-209ENST00000458268 NAMPTP43490 491 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 POU5F1BQ06416 359 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 STK38Q15208 465 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 TCEAL5Q5H9L2 206 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 URGCPQ8TCY9 931 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 ZNF558Q96NG5 402 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 CLIC6Q96NY7 704 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 MRPL9Q9BYD2 267 aaKnown RBP20.64■□□□□ 0.89
USP39-209ENST00000458268 CSRNP2Q9H175 543 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 IGFLR1Q9H665 355 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 RSAD1Q9HA92 442 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 PRMT7Q9NVM4 692 aaPredicted RBP20.64■□□□□ 0.89
USP39-209ENST00000458268 TFIP11Q9UBB9 837 aaKnown RBP20.64■□□□□ 0.89
USP39-209ENST00000458268 DAXXQ9UER7 740 aaPredicted RBP20.64■□□□□ 0.89
USP39-209ENST00000458268 IPPQ9Y573 584 aa20.64■□□□□ 0.89
USP39-209ENST00000458268 NPHP3-ACAD11A0A0J9YXS1 232 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 FGF18O76093 207 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 KRT18P05783 430 aaKnown RBP20.63■□□□□ 0.89
USP39-209ENST00000458268 PLCG1P19174 1290 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 PRPF4BQ13523 1007 aaKnown RBP20.63■□□□□ 0.89
USP39-209ENST00000458268 PTPAQ15257 358 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 MAPK6Q16659 721 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 AMHR2Q16671 573 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 TMEM119Q4V9L6 283 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 NOMO2Q5JPE7 1267 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 KCNT2Q6UVM3 1135 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 IFNLR1Q8IU57 520 aaPredicted RBP20.63■□□□□ 0.89
USP39-209ENST00000458268 P2RX5Q93086 422 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 DRC1Q96MC2 740 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 NSUN3Q9H649 340 aaKnown RBP20.63■□□□□ 0.89
USP39-209ENST00000458268 PCDHGC5Q9Y5F6 944 aa20.63■□□□□ 0.89
USP39-209ENST00000458268 POMCP01189 267 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 DNAJB1P25685 340 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 DMP1Q13316 513 aaPredicted RBP20.62■□□□□ 0.89
USP39-209ENST00000458268 PCBP1Q15365 356 aaKnown RBP eCLIP20.62■□□□□ 0.89
USP39-209ENST00000458268 HYIQ5T013 277 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 CDCA2Q69YH5 1023 aaPredicted RBP20.62■□□□□ 0.89
USP39-209ENST00000458268 AGMOQ6ZNB7 445 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 GPBP1Q86WP2 473 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 SMG8Q8ND04 991 aaKnown RBP20.62■□□□□ 0.89
USP39-209ENST00000458268 SPPL3Q8TCT6 385 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 HLA-CQ95604 372 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 EPSTI1Q96J88 318 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 TRAIPQ9BWF2 469 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 NFKBIZQ9BYH8 718 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 LMAN2LQ9H0V9 348 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 RNF39Q9H2S5 420 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 NXF3Q9H4D5 531 aaKnown RBP20.62■□□□□ 0.89
USP39-209ENST00000458268 ZHX3Q9H4I2 956 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 KMT5AQ9NQR1 393 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 TBC1D13Q9NVG8 400 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 PARP2Q9UGN5 583 aa20.62■□□□□ 0.89
USP39-209ENST00000458268 FBXO2Q9UK22 296 aaPredicted RBP20.62■□□□□ 0.89
USP39-209ENST00000458268 TDRD15B5MCY1 1934 aaKnown RBP20.62■□□□□ 0.89
USP39-209ENST00000458268 TCF20Q9UGU0 1960 aaKnown RBP20.61■□□□□ 0.89
USP39-209ENST00000458268 TTLL13PA6NNM8 815 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 ZNF623O75123 536 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 OFD1O75665 1012 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 AKAP5P24588 427 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 IRS1P35568 1242 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 TXLNAP40222 546 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 MLH1P40692 756 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 MCM6Q14566 821 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 SLC27A1Q6PCB7 646 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 C1orf186Q6ZWK4 172 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 USP49Q70CQ1 688 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 RBM23Q86U06 439 aaKnown RBP20.61■□□□□ 0.89
USP39-209ENST00000458268 HACE1Q8IYU2 909 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 SYT2Q8N9I0 419 aaPredicted RBP20.61■□□□□ 0.89
USP39-209ENST00000458268 CCDC51Q96ER9 411 aa20.61■□□□□ 0.89
USP39-209ENST00000458268 ZNF396Q96N95 335 aaPredicted RBP20.61■□□□□ 0.89
USP39-209ENST00000458268 FAM193BQ96PV7 902 aaPredicted RBP20.61■□□□□ 0.89
USP39-209ENST00000458268 CNTNAP2Q9UHC6 1331 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 N4BP3O15049 544 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 SLC16A4O15374 487 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 EDN1P05305 212 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 ZSCAN22P10073 491 aaPredicted RBP20.6■□□□□ 0.89
USP39-209ENST00000458268 NCLP19338 710 aaKnown RBP20.6■□□□□ 0.89
USP39-209ENST00000458268 NPTX2P47972 431 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 ALDH7A1P49419 539 aaKnown RBP20.6■□□□□ 0.89
USP39-209ENST00000458268 SLC12A3P55017 1021 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 BCAR1P56945 870 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 MRPS5P82675 430 aaKnown RBP20.6■□□□□ 0.89
USP39-209ENST00000458268 NAALADL2Q58DX5 795 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 PLPP4Q5VZY2 271 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms