RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 LPPQ93052 612 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 LZTS1Q9Y250 596 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 INPP5FQ9Y2H2 1132 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 BTBD18B2RXH4 712 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 NEMFO60524 1076 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 ALDH7A1P49419 539 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 RAB27AP51159 221 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 SAFBQ15424 915 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 GLB1LQ6UWU2 654 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 ZNF579Q8NAF0 562 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 TCP11Q8WWU5 503 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 PRPF31Q8WWY3 499 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 TMEM169Q96HH4 297 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 MTRQ99707 1265 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 MFSD1Q9H3U5 465 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 FAM105AQ9NUU6 356 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 PCDHA12Q9UN75 941 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 SORCS3Q9UPU3 1222 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 NR2E1Q9Y466 385 aa17.57■□□□□ 0.4
CHCHD3-204ENST00000457942 NT5C1B-RDH14C9J2C7 533 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 GAS2O43903 313 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 ATP2B1P20020 1258 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 FOXK2Q01167 660 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 RNASELQ05823 741 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 LAMTOR4Q0VGL1 99 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 KCNC3Q14003 757 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 BMS1Q14692 1282 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 TMEM87AQ8NBN3 555 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 TNFRSF25Q93038 417 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 EIF2AK1Q9BQI3 630 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 GBP3Q9H0R5 595 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 DHX33Q9H6R0 707 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 NGRNQ9NPE2 291 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 AGPAT5Q9NUQ2 364 aa17.56■□□□□ 0.4
CHCHD3-204ENST00000457942 PROB1E7EW31 1015 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 ERLIN2O94905 339 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 NBL1P41271 181 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 TXKP42681 527 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 BCAR1P56945 870 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 GUCY1B3Q02153 619 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 SPIRE1Q08AE8 756 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 SMC1AQ14683 1233 aaKnown RBP17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 RARS2Q5T160 578 aaKnown RBP17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 KANK3Q6NY19 840 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 SRGAP1Q7Z6B7 1085 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 SLC39A11Q8N1S5 342 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 RNF149Q8NC42 400 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 FLCNQ8NFG4 579 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 URGCPQ8TCY9 931 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 PGBD4Q96DM1 585 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 TTC12Q9H892 705 aaPredicted RBP17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 IFT122Q9HBG6 1241 aa17.55■□□□□ 0.4
CHCHD3-204ENST00000457942 ZBTB39O15060 712 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 SEC24BO95487 1268 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 GNL2Q13823 731 aaKnown RBP17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 NOMO2Q5JPE7 1267 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 CCDC83Q8IWF9 413 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 ADSSL1Q8N142 457 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 C12orf76Q8N812 135 aaPredicted RBP17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 RSPH1Q8WYR4 309 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 TRAIPQ9BWF2 469 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 PCDHB2Q9Y5E7 798 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 HCFC2Q9Y5Z7 792 aa17.54■□□□□ 0.4
CHCHD3-204ENST00000457942 CACNA1AO00555 2505 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 MEIS3P2A8K0S8 358 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 ASAP2O43150 1006 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 SLITRK3O94933 977 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 MCM7P33993 719 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 ID4P47928 161 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 TFDP1Q14186 410 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 TPRNQ4KMQ1 711 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 ASTLQ6HA08 431 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 CES5AQ6NT32 575 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 TMEM184AQ6ZMB5 413 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 UBALD2Q8IYN6 164 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 TDRD5Q8NAT2 981 aaKnown RBP17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 FEZF2Q8TBJ5 459 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 CASP10Q92851 521 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 NKD2Q969F2 451 aaPredicted RBP17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 C8orf76Q96K31 380 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 MINDY3Q9H8M7 445 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 TBC1D13Q9NVG8 400 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 LIMCH1Q9UPQ0 1083 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 DMXL1Q9Y485 3027 aa17.53■□□□□ 0.4
CHCHD3-204ENST00000457942 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 CARNS1A5YM72 827 aa17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 INO80B-WBP1J3KQ70 363 aa17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 WNT7AO00755 349 aa17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 HOXB8P17481 243 aaPredicted RBP17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 NCBP1Q09161 790 aaKnown RBP17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 ST3GAL1Q11201 340 aa17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 MXD4Q14582 209 aaPredicted RBP17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 FAM193BQ96PV7 902 aaPredicted RBP17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 RSAD1Q9HA92 442 aa17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 LIMD1Q9UGP4 676 aa17.52■□□□□ 0.4
CHCHD3-204ENST00000457942 POTEMA6NI47 508 aa17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 ZNF623O75123 536 aa17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 DGAT1O75907 488 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms