RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PIN4Q9Y237 131 aaKnown RBP15.58■□□□□ 0.08
SMPD4-215ENST00000457039 PHLPP2Q6ZVD8 1323 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 CNTNAP2Q9UHC6 1331 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 MYH11P35749 1972 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 TTC3P53804 2025 aa15.58■□□□□ 0.08
SMPD4-215ENST00000457039 A0A1B0GUA9 196 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 TRAK2O60296 914 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 GJB5O95377 273 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 PRKCBP05771 671 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 GAP43P17677 238 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 CASP1P29466 404 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 SMTNP53814 917 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 SMAD3P84022 425 aaKnown RBP15.57■□□□□ 0.08
SMPD4-215ENST00000457039 FAM160A1Q05DH4 1040 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 UBXN11Q5T124 520 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 KRBA2Q6ZNG9 492 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 SFR1Q86XK3 245 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 GRAMD1CQ8IYS0 662 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 ST6GALNAC4Q9H4F1 302 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 RC3H2Q9HBD1 1191 aaKnown RBP15.57■□□□□ 0.08
SMPD4-215ENST00000457039 DACT1Q9NYF0 836 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 SEL1LQ9UBV2 794 aa15.57■□□□□ 0.08
SMPD4-215ENST00000457039 A0A0U1RQF3 1178 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 H0YCG3 227 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 K7ERI5 159 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 SOX1O00570 391 aaPredicted RBP15.56■□□□□ 0.08
SMPD4-215ENST00000457039 PPP1R37O75864 691 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 IDEP14735 1019 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 ATF7P17544 494 aaPredicted RBP15.56■□□□□ 0.08
SMPD4-215ENST00000457039 SCP2P22307 547 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 AFMP43652 599 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 HTRA4P83105 476 aaPredicted RBP15.56■□□□□ 0.08
SMPD4-215ENST00000457039 EHHADHQ08426 723 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 COASYQ13057 564 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 CUL4BQ13620 913 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 NT5DC1Q5TFE4 455 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 NOTUMQ6P988 496 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 HAUS6Q7Z4H7 955 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 ZNF598Q86UK7 904 aaKnown RBP15.56■□□□□ 0.08
SMPD4-215ENST00000457039 NPAS4Q8IUM7 802 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 FAM178BQ8IXR5 827 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 CCDC51Q96ER9 411 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 CPB2Q96IY4 423 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 STRA6Q9BX79 667 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 BLZF1Q9H2G9 400 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 ZHX3Q9H4I2 956 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 ELAC1Q9H777 363 aaKnown RBP15.56■□□□□ 0.08
SMPD4-215ENST00000457039 OLFML3Q9NRN5 406 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 FAM105AQ9NUU6 356 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 PANK4Q9NVE7 773 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 COL4A6Q14031 1691 aa15.56■□□□□ 0.08
SMPD4-215ENST00000457039 K7ENM7 598 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 GTPBP6O43824 516 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-215ENST00000457039 KLRC4O43908 158 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 ZNF623O75123 536 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 MYL1P05976 194 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 LIG1P18858 919 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 NMT1P30419 496 aaKnown RBP15.55■□□□□ 0.08
SMPD4-215ENST00000457039 RABGGTBP53611 331 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 UBE2HP62256 183 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 ASIC1P78348 528 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 GTF2BQ00403 316 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 PRPF4BQ13523 1007 aaKnown RBP15.55■□□□□ 0.08
SMPD4-215ENST00000457039 HERC4Q5GLZ8 1057 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-215ENST00000457039 TWF2Q6IBS0 349 aaKnown RBP15.55■□□□□ 0.08
SMPD4-215ENST00000457039 UNC13DQ70J99 1090 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 ZNF720Q7Z2F6 126 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 ECHDC2Q86YB7 292 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 CCDC65Q8IXS2 484 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 SLC17A8Q8NDX2 589 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 CNNM3Q8NE01 707 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 PBX4Q9BYU1 374 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 PDZD7Q9H5P4 517 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 TMEM161AQ9NX61 479 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 USP20Q9Y2K6 914 aa15.55■□□□□ 0.08
SMPD4-215ENST00000457039 PVALEFA0A1B0GWK0 134 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 PRPF40AO75400 957 aaKnown RBP15.54■□□□□ 0.08
SMPD4-215ENST00000457039 NR1I2O75469 434 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 UPP2O95045 317 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 PRR29P0C7W0 189 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 PBX2P40425 430 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 RAB27AP51159 221 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 NCBP1Q09161 790 aaKnown RBP15.54■□□□□ 0.08
SMPD4-215ENST00000457039 SLC27A1Q6PCB7 646 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 CDR2LQ86X02 465 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-215ENST00000457039 ZNF689Q96CS4 500 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-215ENST00000457039 TIGD1Q96MW7 591 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 RAD9AQ99638 391 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 ACO2Q99798 780 aaKnown RBP15.54■□□□□ 0.08
SMPD4-215ENST00000457039 EIF2AQ9BY44 585 aaKnown RBP15.54■□□□□ 0.08
SMPD4-215ENST00000457039 MRPL4Q9BYD3 311 aaKnown RBP15.54■□□□□ 0.08
SMPD4-215ENST00000457039 FGFBP2Q9BYJ0 223 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 PTPRHQ9HD43 1115 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 RNF19AQ9NV58 838 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 TBX20Q9UMR3 447 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 YBX2Q9Y2T7 364 aaKnown RBP15.54■□□□□ 0.08
SMPD4-215ENST00000457039 PCDHA11Q9Y5I1 949 aa15.54■□□□□ 0.08
SMPD4-215ENST00000457039 CHD9Q3L8U1 2897 aa15.53■□□□□ 0.08
SMPD4-215ENST00000457039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-215ENST00000457039 ABLIM1O14639 778 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms