RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 NCK2O43639 380 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 PLA2G4BP0C869 781 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 ITGA4P13612 1032 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 ALDH7A1P49419 539 aaKnown RBP25.59■■□□□ 1.69
CBX3-204ENST00000456948 CEBPZQ03701 1054 aaKnown RBP25.59■■□□□ 1.69
CBX3-204ENST00000456948 KRT17Q04695 432 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 RNASELQ05823 741 aaKnown RBP25.59■■□□□ 1.69
CBX3-204ENST00000456948 FAM187BQ17R55 369 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 CLLU1OSQ5K130 101 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 PPP4R3CPQ6ZMV5 832 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 ZNF558Q96NG5 402 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 PLIN2Q99541 437 aa25.59■■□□□ 1.69
CBX3-204ENST00000456948 NSUN3Q9H649 340 aaKnown RBP25.59■■□□□ 1.69
CBX3-204ENST00000456948 RBM19Q9Y4C8 960 aaKnown RBP25.59■■□□□ 1.69
CBX3-204ENST00000456948 SRPRBQ9Y5M8 271 aaKnown RBP25.59■■□□□ 1.69
CBX3-204ENST00000456948 COL4A4P53420 1690 aaPredicted RBP25.58■■□□□ 1.69
CBX3-204ENST00000456948 CCDC169A6NNP5 214 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 ATF7P17544 494 aaPredicted RBP25.58■■□□□ 1.69
CBX3-204ENST00000456948 ARF4P18085 180 aaPredicted RBP25.58■■□□□ 1.69
CBX3-204ENST00000456948 NCLP19338 710 aaKnown RBP25.58■■□□□ 1.69
CBX3-204ENST00000456948 SMTNP53814 917 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 PRPF4BQ13523 1007 aaKnown RBP25.58■■□□□ 1.69
CBX3-204ENST00000456948 NOMO2Q5JPE7 1267 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 TJAP1Q5JTD0 557 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 SLC27A1Q6PCB7 646 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 C1orf186Q6ZWK4 172 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 COLGALT1Q8NBJ5 622 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 SYMPKQ92797 1274 aaKnown RBP25.58■■□□□ 1.69
CBX3-204ENST00000456948 HLA-CQ95604 372 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 CPB2Q96IY4 423 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 PNMA5Q96PV4 448 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 FAM193BQ96PV7 902 aaPredicted RBP25.58■■□□□ 1.69
CBX3-204ENST00000456948 ADPGKQ9BRR6 497 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 FZD8Q9H461 694 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 ALG13Q9NP73 1137 aaKnown RBP25.58■■□□□ 1.69
CBX3-204ENST00000456948 RNF19AQ9NV58 838 aa25.58■■□□□ 1.69
CBX3-204ENST00000456948 A0A1B0GUA9 196 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 K7ERI5 159 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 N4BP3O15049 544 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 GRM6O15303 877 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 HIP1RO75146 1068 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 GUCY2CP25092 1073 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 MARCKSP29966 332 aaPredicted RBP25.57■■□□□ 1.68
CBX3-204ENST00000456948 BMS1Q14692 1282 aaKnown RBP25.57■■□□□ 1.68
CBX3-204ENST00000456948 STK38Q15208 465 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 PTPAQ15257 358 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 TMEM119Q4V9L6 283 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 FAM173BQ6P4H8 233 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 LPPQ93052 612 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 CCSER1Q9C0I3 900 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 CWH43Q9H720 699 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 RSAD1Q9HA92 442 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 INPP5FQ9Y2H2 1132 aa25.57■■□□□ 1.68
CBX3-204ENST00000456948 MORC2Q9Y6X9 1032 aaPredicted RBP25.57■■□□□ 1.68
CBX3-204ENST00000456948 ACKR2O00590 384 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 FGF18O76093 207 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 ITGB1P05556 798 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 PRKCBP05771 671 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 PEX3P56589 373 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 MRPS5P82675 430 aaKnown RBP25.56■■□□□ 1.68
CBX3-204ENST00000456948 SLC39A14Q15043 492 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 AMHR2Q16671 573 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 LONRF3Q496Y0 759 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 PDE12Q6L8Q7 609 aaKnown RBP25.56■■□□□ 1.68
CBX3-204ENST00000456948 KCNT2Q6UVM3 1135 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 SPPL3Q8TCT6 385 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 RUSC1Q9BVN2 902 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 KMT5AQ9NQR1 393 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 SPG21Q9NZD8 308 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 IPPQ9Y573 584 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 REV3LO60673 3130 aa25.56■■□□□ 1.68
CBX3-204ENST00000456948 OFD1O75665 1012 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 ZSCAN22P10073 491 aaPredicted RBP25.55■■□□□ 1.68
CBX3-204ENST00000456948 LIG1P18858 919 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 BECN1Q14457 450 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 UBXN11Q5T124 520 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 KCNK18Q7Z418 384 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 KRI1Q8N9T8 703 aaKnown RBP25.55■■□□□ 1.68
CBX3-204ENST00000456948 SPRYD3Q8NCJ5 442 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 MICAL1Q8TDZ2 1067 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 POF1BQ8WVV4 589 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 BSNDQ8WZ55 320 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 ASB2Q96Q27 587 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 USP28Q96RU2 1077 aa25.55■■□□□ 1.68
CBX3-204ENST00000456948 H0YCG3 227 aa25.54■■□□□ 1.68
CBX3-204ENST00000456948 KRT18P05783 430 aaKnown RBP25.54■■□□□ 1.68
CBX3-204ENST00000456948 SLC12A3P55017 1021 aa25.54■■□□□ 1.68
CBX3-204ENST00000456948 PLCB3Q01970 1234 aa25.54■■□□□ 1.68
CBX3-204ENST00000456948 ATL3Q6DD88 541 aa25.54■■□□□ 1.68
CBX3-204ENST00000456948 LRRC55Q6ZSA7 311 aa25.54■■□□□ 1.68
CBX3-204ENST00000456948 LARSQ9P2J5 1176 aaKnown RBP25.54■■□□□ 1.68
CBX3-204ENST00000456948 FBXO2Q9UK22 296 aaPredicted RBP25.54■■□□□ 1.68
CBX3-204ENST00000456948 LZTS1Q9Y250 596 aa25.54■■□□□ 1.68
CBX3-204ENST00000456948 GIT1Q9Y2X7 761 aa25.54■■□□□ 1.68
CBX3-204ENST00000456948 B4GALT5O43286 388 aa25.53■■□□□ 1.68
CBX3-204ENST00000456948 SCP2P22307 547 aa25.53■■□□□ 1.68
CBX3-204ENST00000456948 NPTX2P47972 431 aa25.53■■□□□ 1.68
CBX3-204ENST00000456948 KARSQ15046 597 aaKnown RBP25.53■■□□□ 1.68
CBX3-204ENST00000456948 AGMOQ6ZNB7 445 aa25.53■■□□□ 1.68
CBX3-204ENST00000456948 EIF2AQ9BY44 585 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms