RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 NOVA2Q9UNW9 492 aaKnown RBP13.45□□□□□ -0.26
LINC00959-201ENST00000456581 TRAF3IP3Q9Y228 551 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 UBIAD1Q9Y5Z9 338 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 ZBED4O75132 1171 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 HIP1RO75146 1068 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 CCNE2O96020 404 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 HSPA9P38646 679 aaKnown RBP13.45□□□□□ -0.26
LINC00959-201ENST00000456581 EDRF1Q3B7T1 1238 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 RDH13Q8NBN7 331 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 SCFD2Q8WU76 684 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 KLRG1Q96E93 195 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 OSBPL7Q9BZF2 842 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 EDEM3Q9BZQ6 932 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 ISCUQ9H1K1 167 aa13.45□□□□□ -0.26
LINC00959-201ENST00000456581 DOCK5Q9H7D0 1870 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 ARHGEF35A5YM69 484 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 FOXO6A8MYZ6 492 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 KIAA0754O94854 1291 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 AFPP02771 609 aaKnown RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 XRCC5P13010 732 aaKnown RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 CYP2J2P51589 502 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 NPEPPSP55786 919 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 MAPK7Q13164 816 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 BYSLQ13895 437 aaKnown RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 TMEM132BQ14DG7 1078 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 PCNX4Q63HM2 1172 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 DCAF15Q66K64 600 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 PLA2G4FQ68DD2 849 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 MCF2L2Q86YR7 1114 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 FAM178BQ8IXR5 827 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 ZC3H3Q8IXZ2 948 aaKnown RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 GLG1Q92896 1179 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 ERVK-5Q9HDB9 667 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 PXMP2Q9NR77 195 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 SEPT11Q9NVA2 429 aaKnown RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 FRMPD4Q14CM0 1322 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 GNA14O95837 355 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 FGGP02679 453 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 TRIM49P0CI25 452 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 TRIM49CP0CI26 452 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 HOXA7P31268 230 aaPredicted RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 SOX10P56693 466 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 DCAF12L1Q5VU92 463 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 ARHGEF16Q5VV41 709 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 ZNF720Q7Z2F6 126 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 SUGP1Q8IWZ8 645 aaKnown RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 WHAMMQ8TF30 809 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 RUBCNQ92622 972 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 RIT2Q99578 217 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 TYW1Q9NV66 732 aaKnown RBP13.44□□□□□ -0.26
LINC00959-201ENST00000456581 ZNF112Q9UJU3 913 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 ATP8A1Q9Y2Q0 1164 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 STK24Q9Y6E0 443 aa13.44□□□□□ -0.26
LINC00959-201ENST00000456581 SSC5DA1L4H1 1573 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 RLFQ13129 1914 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 PGRMC1O00264 195 aaKnown RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 PDXKO00764 312 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 SHBGP04278 402 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 MYZAPP0CAP1 466 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 MARSP56192 900 aaKnown RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 MAGOHP61326 146 aaKnown RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 FSTL1Q12841 308 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 CCDC13Q8IYE1 715 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 CNPY4Q8N129 248 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 MREGQ8N565 214 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 SLC35C1Q96A29 364 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 MAGOHBQ96A72 148 aaKnown RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 CYFIP2Q96F07 1278 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 LUC7LQ9NQ29 371 aaKnown RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 OLFML3Q9NRN5 406 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 DDX20Q9UHI6 824 aaKnown RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 ZNF214Q9UL59 606 aaPredicted RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 KIAA1217Q5T5P2 1943 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 BUB1BO60566 1050 aaPredicted RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 GALCP54803 685 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 DHX9Q08211 1270 aaKnown RBP13.43□□□□□ -0.26
LINC00959-201ENST00000456581 FAM228AQ86W67 206 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 REPS2Q8NFH8 660 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 ELMO3Q96BJ8 720 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 ARHGEF26Q96DR7 871 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 RNF14Q9UBS8 474 aa13.43□□□□□ -0.26
LINC00959-201ENST00000456581 FOXR2Q6PJQ5 311 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 CPNE8Q86YQ8 564 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 OLIG1Q8TAK6 271 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC00959-201ENST00000456581 NUCKS1Q9H1E3 243 aaKnown RBP13.42□□□□□ -0.26
LINC00959-201ENST00000456581 R3HDMLQ9H3Y0 253 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 PCIF1Q9H4Z3 704 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 GGT7Q9UJ14 662 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 DOCK1Q14185 1865 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 GOLGA6L10A6NI86 522 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 ADM5C9JUS6 153 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 CALUO43852 315 aaPredicted RBP13.42□□□□□ -0.26
LINC00959-201ENST00000456581 RGS20O76081 388 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 P4HBP07237 508 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms