RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ERVK-9P63128 1117 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 PPFIA1Q13136 1202 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 RNF207Q6ZRF8 634 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 PIK3R5Q8WYR1 880 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 ARHGEF26Q96DR7 871 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 RMDN3Q96TC7 470 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 AP1M1Q9BXS5 423 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 TAF1DQ9H5J8 278 aaPredicted RBP19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 RPAP3Q9H6T3 665 aaPredicted RBP19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 GPRC5CQ9NQ84 441 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 ANKRD62A6NC57 917 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 SLC16A4O15374 487 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 DDX3YO15523 660 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 LRRN2O75325 713 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 SFNP31947 248 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 GCLMP48507 274 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 KRT76Q01546 638 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 CETN1Q12798 172 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 MTMR2Q13614 643 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 ARL8AQ96BM9 186 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 IWS1Q96ST2 819 aa19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 WDR64B1ANS9 1081 aa19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 SART1O43290 800 aaKnown RBP19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 ABCB4P21439 1286 aa19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 ECHS1P30084 290 aa19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 PEX3P56589 373 aa19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 TTMPQ5BVD1 217 aa19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 SLC17A8Q8NDX2 589 aa19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 JDP2Q8WYK2 163 aa19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 CCDC43Q96MW1 224 aaKnown RBP19.89■□□□□ 0.77
SEMA3B-209ENST00000456560 KRIT1O00522 736 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 VWA5AO00534 786 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 FDX1P10109 184 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 ITGA4P13612 1032 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 CORO7P57737 925 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 TCEAL1Q15170 157 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 XKR9Q5GH70 373 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 SLC20A1Q8WUM9 679 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 THAP2Q9H0W7 228 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 PARP14Q460N5 1801 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 ANKRD65E5RJM6 399 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 HSPA9P38646 679 aaKnown RBP19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 GUCY2FP51841 1108 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 HADHBP55084 474 aaKnown RBP19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 CUL1Q13616 776 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 TTC31Q49AM3 519 aaPredicted RBP19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 CFAP58Q5T655 872 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 XRRA1Q6P2D8 792 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 CD302Q8IX05 232 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 SYT17Q9BSW7 474 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 TMEM117Q9H0C3 514 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 COG5Q9UP83 839 aa19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 DIS3Q9Y2L1 958 aaKnown RBP19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 CTDP1Q9Y5B0 961 aaPredicted RBP19.88■□□□□ 0.77
SEMA3B-209ENST00000456560 ADRB2P07550 413 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 RPS12P25398 132 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 ARHGEF16Q5VV41 709 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 PLA2G4FQ68DD2 849 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 RDM1Q8NG50 284 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 RUFY1Q96T51 708 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 SENP7Q9BQF6 1050 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 DDX47Q9H0S4 455 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 SLITRK6Q9H5Y7 841 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 ADSSP30520 456 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 FAM102BQ5T8I3 360 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 NSMFQ6X4W1 530 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 VSIG10LQ86VR7 867 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 TMEM161BQ8NDZ6 487 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 IPO4Q8TEX9 1081 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 ATG4CQ96DT6 458 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 WNK4Q96J92 1243 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 MOV10L1Q9BXT6 1211 aaKnown RBP19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 TBX20Q9UMR3 447 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 RIPK3Q9Y572 518 aa19.87■□□□□ 0.77
SEMA3B-209ENST00000456560 ZNF233A6NK53 670 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 ANKRD63C9JTQ0 380 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 BAATQ14032 418 aaPredicted RBP19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 SKIDA1Q1XH10 827 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 DNAJC21Q5F1R6 531 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 DCAF12L1Q5VU92 463 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 ANO5Q75V66 913 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 PPM1EQ8WY54 764 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 HVCN1Q96D96 273 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 SEPT11Q9NVA2 429 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 EXOC7Q9UPT5 735 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 MXI1P50539 228 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 POU5F1Q01860 360 aaKnown RBP19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 ZNF746Q6NUN9 644 aaPredicted RBP19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 MAP4K3Q8IVH8 894 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 RHOT2Q8IXI1 618 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 REPS2Q8NFH8 660 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 RNF146Q9NTX7 359 aa19.86■□□□□ 0.77
SEMA3B-209ENST00000456560 TESPA1A2RU30 521 aaPredicted RBP19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 GOLGA8IPA6NC78 632 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 GOLGA8JA6NMD2 632 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 STBD1O95210 358 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 NPTX2P47972 431 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 PACS2Q86VP3 889 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 CBWD2Q8IUF1 395 aa19.85■□□□□ 0.77
SEMA3B-209ENST00000456560 FAM71AQ8IYT1 594 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms