RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PEX3P56589 373 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 RAD51AP2Q09MP3 1159 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 PRPF4BQ13523 1007 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 STK38Q15208 465 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 PTPAQ15257 358 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 NOMO2Q5JPE7 1267 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 MRPL10Q7Z7H8 261 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 PRIMPOLQ96LW4 560 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 FAM193BQ96PV7 902 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 RUSC1Q9BVN2 902 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 APOL6Q9BWW8 343 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 CWH43Q9H720 699 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 UBN1Q9NPG3 1134 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 CCDC39Q9UFE4 941 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 PUF60Q9UHX1 559 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 KCNG1Q9UIX4 513 aa19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 PRRC2BQ5JSZ5 2229 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-215ENST00000456545 K7ERI5 159 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 B4GALT5O43286 388 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 ITGB1P05556 798 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 PRKCBP05771 671 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 KRT18P05783 430 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 NCLP19338 710 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 ALDH7A1P49419 539 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 KRT17Q04695 432 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 GRIN1Q05586 938 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 DMP1Q13316 513 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 AAK1Q2M2I8 961 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 TMEM119Q4V9L6 283 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 SPECC1Q5M775 1068 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 UBXN11Q5T124 520 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 CDCA2Q69YH5 1023 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 SLC27A1Q6PCB7 646 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 KCNT2Q6UVM3 1135 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 LRRC55Q6ZSA7 311 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 EP400NLQ6ZTU2 488 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 C1orf186Q6ZWK4 172 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 SPPL3Q8TCT6 385 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 POF1BQ8WVV4 589 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 HLA-CQ95604 372 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 PPP2R3CQ969Q6 453 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 USP28Q96RU2 1077 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 EIF2AQ9BY44 585 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 NSUN3Q9H649 340 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 RSAD1Q9HA92 442 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 KMT5AQ9NQR1 393 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 KANSL3Q9P2N6 904 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 TFIP11Q9UBB9 837 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 HCSTQ9UBK5 93 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 COG5Q9UP83 839 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 IPPQ9Y573 584 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 SRPRBQ9Y5M8 271 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 CNTNAP2Q9UHC6 1331 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 CHD7Q9P2D1 2997 aa19.95■□□□□ 0.78
PDLIM2-215ENST00000456545 COL6A3P12111 3177 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 SFI1A8K8P3 1242 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 OFD1O75665 1012 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 FGF18O76093 207 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 NPTXRO95502 500 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 ZSCAN22P10073 491 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 SMTNP53814 917 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 SLC39A14Q15043 492 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 KARSQ15046 597 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 AMHR2Q16671 573 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 FAM187BQ17R55 369 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 FOXD4L6Q3SYB3 417 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 FOXD4L3Q6VB84 417 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 PPP4R3CPQ6ZMV5 832 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 CDR2LQ86X02 465 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 ATXN2LQ8WWM7 1075 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 ADPGKQ9BRR6 497 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 GBP3Q9H0R5 595 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 FZD8Q9H461 694 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 C17orf75Q9HAS0 396 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 SPG21Q9NZD8 308 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 KCND2Q9NZV8 630 aa19.94■□□□□ 0.78
PDLIM2-215ENST00000456545 KIAA1671Q9BY89 1806 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 A0A1B0GUA9 196 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 MEIS3P2A8K0S8 358 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 ACKR2O00590 384 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 N4BP3O15049 544 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 ZC3H11AO75152 810 aaKnown RBP eCLIP19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 PLCG1P19174 1290 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 GUCY2CP25092 1073 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 PPM1AP35813 382 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 MRPS5P82675 430 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 UBE3AQ05086 875 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 TCEAL5Q5H9L2 206 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 AGMOQ6ZNB7 445 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 GPBP1Q86WP2 473 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 KRI1Q8N9T8 703 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 EPSTI1Q96J88 318 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 CLIC6Q96NY7 704 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 KIFC3Q9BVG8 833 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 CCSER1Q9C0I3 900 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 PARP2Q9UGN5 583 aa19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 FBXO2Q9UK22 296 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 RBM19Q9Y4C8 960 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-215ENST00000456545 CARNS1A5YM72 827 aa19.92■□□□□ 0.78
PDLIM2-215ENST00000456545 NPTX2P47972 431 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms