RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SUPT20HQ8NEM7 779 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 PIGOQ8TEQ8 1089 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 FBF1Q8TES7 1133 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 RPS6KC1Q96S38 1066 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 SYT11Q9BT88 431 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
CLIP4-208ENST00000456385 GPR88Q9GZN0 384 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 RIOX1Q9H6W3 641 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 CPSF2Q9P2I0 782 aaKnown RBP11.08□□□□□ -0.64
CLIP4-208ENST00000456385 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 ASTN1O14525 1302 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 ATP8B3O60423 1300 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 SCN7AQ01118 1682 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 ENTPD5O75356 428 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 WFS1O76024 890 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 CETPP11597 493 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 FOXN2P32314 431 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 EIF6P56537 245 aaKnown RBP11.08□□□□□ -0.64
CLIP4-208ENST00000456385 HYIQ5T013 277 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-208ENST00000456385 SLC51AQ86UW1 340 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 TTC8Q8TAM2 541 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 STK32AQ8WU08 396 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 ERP27Q96DN0 273 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 PWWP2AQ96N64 755 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 NUDCD1Q96RS6 583 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 PLCD4Q9BRC7 762 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 REEP2Q9BRK0 252 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 ROPN1BQ9BZX4 212 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-208ENST00000456385 ZCWPW1Q9H0M4 648 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 DHX36Q9H2U1 1008 aaKnown RBP11.08□□□□□ -0.64
CLIP4-208ENST00000456385 ROPN1Q9HAT0 212 aaPredicted RBP11.08□□□□□ -0.64
CLIP4-208ENST00000456385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLIP4-208ENST00000456385 CYP39A1Q9NYL5 469 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 PARP2Q9UGN5 583 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 BCS1LQ9Y276 419 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 ROBO3Q96MS0 1386 aa11.08□□□□□ -0.64
CLIP4-208ENST00000456385 LRRD1A4D1F6 860 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 PPP1R11O60927 126 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 LRRN2O75325 713 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 ALAS1P13196 640 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 TAC1P20366 129 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 COILP38432 576 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 SKIV2L2P42285 1042 aaKnown RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 PTDSS1P48651 473 aaKnown RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 RPS6KA3P51812 740 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 MTFR1Q15390 333 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 KYNUQ16719 465 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 ARHGAP44Q17R89 818 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 RNF220Q5VTB9 566 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 RNF43Q68DV7 783 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CWF19L1Q69YN2 538 aaKnown RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 VSIG1Q86XK7 387 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 SRRM1Q8IYB3 904 aaKnown RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 TEKT4Q8WW24 435 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 RUNDC3BQ96NL0 473 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 SERPINB12Q96P63 405 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 RAB3IPQ96QF0 476 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 PAIP2Q9BPZ3 127 aaKnown RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 PITPNM3Q9BZ71 974 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 KIAA1683Q9H0B3 1180 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 GPCPD1Q9NPB8 672 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CTTNBP2NLQ9P2B4 639 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 SYNGAP1Q96PV0 1343 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 KDM3AQ9Y4C1 1321 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 ANKRD62A6NC57 917 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CALUO43852 315 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CHRNB2P17787 502 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 ATP6V1C1P21283 382 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 TNFAIP3P21580 790 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 POLD1P28340 1107 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 EPHB2P29323 1055 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 PEX5P50542 639 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 MESDQ14696 234 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 TMEM154Q6P9G4 183 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 ZNF449Q6P9G9 518 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 EPM2AIP1Q7L775 607 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 LONP2Q86WA8 852 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CLEC10AQ8IUN9 316 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 LRRC47Q8N1G4 583 aaKnown RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 SLC20A1Q8WUM9 679 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 UCMAQ8WVF2 138 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 LBHD1Q9BQE6 289 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-208ENST00000456385 ZSWIM1Q9BR11 485 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 STK33Q9BYT3 514 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 LRMDAQ9H2I8 198 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 CHKBQ9Y259 395 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 C2CD2Q9Y426 696 aa11.07□□□□□ -0.64
CLIP4-208ENST00000456385 SNED1Q8TER0 1413 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 PDXKO00764 312 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 ATMINO43313 823 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-208ENST00000456385 GCNT3O95395 438 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 COMTP21964 271 aa11.06□□□□□ -0.64
CLIP4-208ENST00000456385 RFC5P40937 340 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms