RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NUDCD1Q96RS6 583 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 CDC42EP4Q9H3Q1 356 aaKnown RBP4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 CYLDQ9NQC7 956 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 AIPL1Q9NZN9 384 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 MTMR7Q9Y216 660 aa4.9□□□□□ -1.63
DEPDC1-202ENST00000456315 TAF1LQ8IZX4 1826 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 A0A0J9YVX5 310 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 VILLO15195 856 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ECE2O60344 883 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 TXKP42681 527 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 RXRGP48443 463 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 CLNKQ7Z7G1 428 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 JAMLQ86YT9 394 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC25A41Q8N5S1 370 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 CKAP2Q8WWK9 683 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 HAS1Q92839 578 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 RSRC1Q96IZ7 334 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ZNF512Q96ME7 567 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SETDB2Q96T68 719 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SENP6Q9GZR1 1112 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 KCNK13Q9HB14 408 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 CHST7Q9NS84 486 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ARL8BQ9NVJ2 186 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 PACSIN3Q9UKS6 424 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 LMO7Q8WWI1 1683 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ADAMTS7Q9UKP4 1686 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ALS2Q96Q42 1657 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 RSPH10B2B2RC85 870 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 KRIT1O00522 736 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ASMTLO95671 621 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 GSTA1P08263 222 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 RSPH10BP0C881 870 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 VCAM1P19320 739 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 CACNA2D1P54289 1103 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SPAG1Q07617 926 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 RAPGEF1Q13905 1077 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SHROOM1Q2M3G4 852 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ZNF746Q6NUN9 644 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 EFCAB3Q8N7B9 438 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ENDOVQ8N8Q3 282 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ANKS4BQ8N8V4 417 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 GAB3Q8WWW8 586 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 HSPBAP1Q96EW2 488 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 DHTKD1Q96HY7 919 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 TRIM56Q9BRZ2 755 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 KCTD10Q9H3F6 313 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 EFR3BQ9Y2G0 817 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ZNF330Q9Y3S2 320 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 DMXL2Q8TDJ6 3036 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 A0A1W2PQJ5 194 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 USP17L3A6NCW0 530 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 USP17L4A6NCW7 530 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 DCAF8L1A6NGE4 600 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 RIPK2O43353 540 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ALDH2P05091 517 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 UCHL3P15374 230 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ABCB4P21439 1286 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ARRB2P32121 409 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 VPS41P49754 854 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 PTENP60484 403 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 MTA1Q13330 715 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 RCN2Q14257 317 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 BICDL1Q6ZP65 573 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 USP17L1Q7RTZ2 530 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 MFN1Q8IWA4 741 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 RIBC1Q8N443 379 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SNRNP27Q8WVK2 155 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SCG3Q8WXD2 468 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 DDX12PQ92771 950 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 CENPTQ96BT3 561 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 DHX36Q9H2U1 1008 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ALG13Q9NP73 1137 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 BSDC1Q9NW68 430 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 PALM3A6NDB9 673 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 TISP43B9A030 160 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 CYP26A1O43174 497 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 PRDX5P30044 214 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 MAGEA8P43361 318 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 KLC1Q07866 573 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 TMEM266Q2M3C6 531 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 AMOTQ4VCS5 1084 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 TBC1D9BQ66K14 1250 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 MSL1Q68DK7 614 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 FBXL19Q6PCT2 694 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 MYLK4Q86YV6 388 aaPredicted RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SRRM1Q8IYB3 904 aaKnown RBP4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC5A5Q92911 643 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 DYNLL2Q96FJ2 89 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SELENOSQ9BQE4 189 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 PLCD4Q9BRC7 762 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 SPATA16Q9BXB7 569 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 THAP2Q9H0W7 228 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 ARMC7Q9H6L4 198 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 TLE6Q9H808 572 aa4.89□□□□□ -1.63
DEPDC1-202ENST00000456315 CAPN9O14815 690 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ATP9AO75110 1047 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 TPP2P29144 1249 aaPredicted RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 RFC4P35249 363 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms