RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 RNASELQ05823 741 aaKnown RBP19.82■□□□□ 0.76
MSH6-207ENST00000456246 MBTD1Q05BQ5 628 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 PTGDRQ13258 359 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 SMAD4Q13485 552 aaKnown RBP19.82■□□□□ 0.76
MSH6-207ENST00000456246 POTEGQ6S5H5 508 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 HACE1Q8IYU2 909 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 LPPQ93052 612 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 TCF25Q9BQ70 676 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 RSAD1Q9HA92 442 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 TBC1D13Q9NVG8 400 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 LRWD1Q9UFC0 647 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 CD207Q9UJ71 328 aa19.82■□□□□ 0.76
MSH6-207ENST00000456246 ZC3H11AO75152 810 aaKnown RBP eCLIP19.81■□□□□ 0.76
MSH6-207ENST00000456246 GJB2P29033 226 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 GTF2F1P35269 517 aaKnown RBP eCLIP19.81■□□□□ 0.762e-7■■■■■ 27.6
MSH6-207ENST00000456246 CCT6AP40227 531 aaKnown RBP19.81■□□□□ 0.76
MSH6-207ENST00000456246 TOB1P50616 345 aaPredicted RBP19.81■□□□□ 0.76
MSH6-207ENST00000456246 ERVFC1P60507 584 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 UBXN11Q5T124 520 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 MCTP1Q6DN14 999 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 AGMOQ6ZNB7 445 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 ZBTB8OSQ8IWT0 167 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 IGSF22Q8N9C0 903 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 PRIMPOLQ96LW4 560 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 POP1Q99575 1024 aaKnown RBP19.81■□□□□ 0.76
MSH6-207ENST00000456246 CSRNP2Q9H175 543 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 C2orf40Q9H1Z8 148 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 SMC3Q9UQE7 1217 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 INPP5FQ9Y2H2 1132 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 PCDHB6Q9Y5E3 794 aa19.81■□□□□ 0.76
MSH6-207ENST00000456246 LINC01565O15544 149 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 CYP11B2P19099 503 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 PBX3P40426 434 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 DLX2Q07687 328 aaPredicted RBP19.8■□□□□ 0.76
MSH6-207ENST00000456246 COASYQ13057 564 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 NBR1Q14596 966 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 SMC1AQ14683 1233 aaKnown RBP19.8■□□□□ 0.76
MSH6-207ENST00000456246 PPP2R5AQ15172 486 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 DUSP6Q16828 381 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 PLPP4Q5VZY2 271 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 PADI6Q6TGC4 694 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 TMC7Q7Z402 723 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 RBM23Q86U06 439 aaKnown RBP19.8■□□□□ 0.76
MSH6-207ENST00000456246 GJD3Q8N144 294 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 MSLNLQ96KJ4 702 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 C1QTNF1Q9BXJ1 281 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 TRIM6Q9C030 488 aaPredicted RBP19.8■□□□□ 0.76
MSH6-207ENST00000456246 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.8■□□□□ 0.76
MSH6-207ENST00000456246 PRMT7Q9NVM4 692 aaPredicted RBP19.8■□□□□ 0.76
MSH6-207ENST00000456246 ZMYM2Q9UBW7 1377 aa19.8■□□□□ 0.76
MSH6-207ENST00000456246 LRRIQ4A6NIV6 560 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 MBTPS2O43462 519 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 CD2BP2O95400 341 aaKnown RBP19.79■□□□□ 0.76
MSH6-207ENST00000456246 EYA4O95677 639 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 ITGA4P13612 1032 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 SMAD2Q15796 467 aaKnown RBP19.79■□□□□ 0.76
MSH6-207ENST00000456246 AMHR2Q16671 573 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 LONRF3Q496Y0 759 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 KRT79Q5XKE5 535 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 CDCA2Q69YH5 1023 aaPredicted RBP19.79■□□□□ 0.76
MSH6-207ENST00000456246 DTHD1Q6ZMT9 781 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 SNX29Q8TEQ0 813 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 TMEM175Q9BSA9 504 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 NRDE2Q9H7Z3 1164 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 PCDHGC5Q9Y5F6 944 aa19.79■□□□□ 0.76
MSH6-207ENST00000456246 A0A087WWV3 80 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 MEIS3P2A8K0S8 358 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 INPPL1O15357 1258 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 ARF4P18085 180 aaPredicted RBP19.78■□□□□ 0.76
MSH6-207ENST00000456246 SSTR3P32745 418 aaPredicted RBP19.78■□□□□ 0.76
MSH6-207ENST00000456246 NAMPTP43490 491 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 GIT2Q14161 759 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 FAM187BQ17R55 369 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 SLC27A1Q6PCB7 646 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 MAEAQ7L5Y9 396 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 ADHFE1Q8IWW8 467 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 KCTD17Q8N5Z5 321 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 SMRP1Q8NCR6 262 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 KIFAP3Q92845 792 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 FAM193BQ96PV7 902 aaPredicted RBP19.78■□□□□ 0.76
MSH6-207ENST00000456246 GPRC5CQ9NQ84 441 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 CLEC1BQ9P126 229 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 IPPQ9Y573 584 aa19.78■□□□□ 0.76
MSH6-207ENST00000456246 PER2O15055 1255 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 GLP2RO95838 553 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 GALTP07902 379 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 ZP2Q05996 745 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 CLUL1Q15846 466 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 TMEM184AQ6ZMB5 413 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 DDX53Q86TM3 631 aaKnown RBP19.77■□□□□ 0.76
MSH6-207ENST00000456246 MRPL43Q8N983 215 aaKnown RBP19.77■□□□□ 0.76
MSH6-207ENST00000456246 SMG8Q8ND04 991 aaKnown RBP19.77■□□□□ 0.76
MSH6-207ENST00000456246 IGSF21Q96ID5 467 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 CPB2Q96IY4 423 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 IFT74Q96LB3 600 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 BHMT2Q9H2M3 363 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 KIAA1024Q9UPX6 916 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 GIT1Q9Y2X7 761 aa19.77■□□□□ 0.76
MSH6-207ENST00000456246 A0A1B0GUA9 196 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms