RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 SH2D4BQ5SQS7 431 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 AGBL2Q5U5Z8 902 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 RNF220Q5VTB9 566 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 PRAMEF18Q5VWM3 479 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 HAUS3Q68CZ6 603 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 ANKS4BQ8N8V4 417 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 ATP11CQ8NB49 1132 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 HAS1Q92839 578 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 FAM136AQ96C01 138 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 CALML4Q96GE6 196 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 SLF1Q9BQI6 1058 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 POLR3CQ9BUI4 534 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-218ENST00000456174 CUEDC2Q9H467 287 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 LUC7LQ9NQ29 371 aaKnown RBP8.23□□□□□ -1.09
HDAC9-218ENST00000456174 CYP3A7-CYP3A51PA0A087WV96 503 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 SMAPO00193 183 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 PIK3CDO00329 1044 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 ENC1O14682 589 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 TEX33O43247 280 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 RPN1P04843 607 aaKnown RBP8.22□□□□□ -1.09
HDAC9-218ENST00000456174 CYP3A7P24462 503 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-218ENST00000456174 VAV2P52735 878 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 OXCT1P55809 520 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 KCNJ2P63252 427 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 ARHGAP4P98171 946 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 FMR1Q06787 632 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC9-218ENST00000456174 ADCY1Q08828 1119 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 HSP90AA4PQ58FG1 418 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 OLFML1Q6UWY5 402 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 PIGWQ7Z7B1 504 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 TMEM110Q86TL2 294 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 IQCF2Q8IXL9 164 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 MYOCDQ8IZQ8 938 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 LRRC15Q8TF66 581 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 CRYGNQ8WXF5 182 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 RSPH1Q8WYR4 309 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 LPAR1Q92633 364 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 ZNF653Q96CK0 615 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 HAPLN3Q96S86 360 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 KIAA1683Q9H0B3 1180 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 MAGEF1Q9HAY2 307 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 PLCB1Q9NQ66 1216 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 GDF3Q9NR23 364 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 KBTBD4Q9NVX7 518 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 GGA3Q9NZ52 723 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 GUCA1BQ9UMX6 200 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 AGAP1Q9UPQ3 857 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 PARP14Q460N5 1801 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 PHIPQ8WWQ0 1821 aa8.22□□□□□ -1.09
HDAC9-218ENST00000456174 POTEMA6NI47 508 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 WDR46O15213 610 aaKnown RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 CFBP00751 764 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 ALOX15P16050 662 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 CD44P16070 742 aaKnown RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 PRLRP16471 622 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 GSTT1P30711 240 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 PCK1P35558 622 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 HSPA9P38646 679 aaKnown RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 FXR1P51114 621 aaKnown RBP eCLIP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 HIRAP54198 1017 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 USP46P62068 366 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 PPP2R2AP63151 447 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 LACTBP83111 547 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 LSAMPQ13449 338 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 TRIM14Q14142 442 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 TRIM68Q6AZZ1 485 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 MOXD1Q6UVY6 613 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 CPLX4Q7Z7G2 160 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 CREG2Q8IUH2 290 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 SLC15A3Q8IY34 581 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 TRMT44Q8IYL2 757 aaKnown RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 SMYD4Q8IYR2 804 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 CFAP61Q8NHU2 1237 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 DYDC1Q8WWB3 177 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 GJA10Q969M2 543 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 CHMP6Q96FZ7 201 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 CDK5RAP3Q96JB5 506 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 MBOAT7Q96N66 472 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 PURBQ96QR8 312 aaKnown RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 SYT17Q9BSW7 474 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 CCDC28BQ9BUN5 200 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 ARHGEF3Q9NR81 526 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 ABHD10Q9NUJ1 306 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 RMND1Q9NWS8 449 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 DLGAP2Q9P1A6 1054 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 ADD3Q9UEY8 706 aaKnown RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 ZNF112Q9UJU3 913 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 PCDHA12Q9UN75 941 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 SH3GLB1Q9Y371 365 aa8.21□□□□□ -1.09
HDAC9-218ENST00000456174 MRPL11Q9Y3B7 192 aaKnown RBP8.21□□□□□ -1.09
HDAC9-218ENST00000456174 PPP1R3GB7ZBB8 358 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 RARAP10276 462 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 SREBF1P36956 1147 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 PEX5P50542 639 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 HDAC4P56524 1084 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 ATP11AP98196 1134 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 SLC7A5Q01650 507 aa8.21□□□□□ -1.1
HDAC9-218ENST00000456174 PLOD1Q02809 727 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-218ENST00000456174 GRB10Q13322 594 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms