RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
TREX1-203ENST00000456089 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 CLASP2O75122 1294 aaKnown RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 MCM7P33993 719 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 SLC11A1P49279 550 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 RNASELQ05823 741 aaKnown RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 CBX2Q14781 532 aaPredicted RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 GLB1LQ6UWU2 654 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 TMEM184AQ6ZMB5 413 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 AGMOQ6ZNB7 445 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 C4orf19Q8IY42 314 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 MRPL43Q8N983 215 aaKnown RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 PSPC1Q8WXF1 523 aaKnown RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 EDAQ92838 391 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 JPH2Q9BR39 696 aaPredicted RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 VN1R3Q9BXE9 311 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 INO80BQ9C086 356 aaPredicted RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 XPNPEP1Q9NQW7 623 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 TSHZ2Q9NRE2 1034 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 AGPAT5Q9NUQ2 364 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.41□□□□□ -0.1
TREX1-203ENST00000456089 HCFC2Q9Y5Z7 792 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 DENND4AQ7Z401 1863 aa14.41□□□□□ -0.1
TREX1-203ENST00000456089 TMEM221A6NGB7 291 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 H3BQV1 296 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 M0R296 226 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 DDHD2O94830 711 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 SLITRK3O94933 977 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 SSBP05455 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
TREX1-203ENST00000456089 GALTP07902 379 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 SRGAP2BP0DMP2 458 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 EPCAMP16422 314 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 HOXA11P31270 313 aaPredicted RBP14.4□□□□□ -0.1
TREX1-203ENST00000456089 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
TREX1-203ENST00000456089 TXKP42681 527 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 ZXDAP98168 799 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 UBXN11Q5T124 520 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 OTUD6AQ7L8S5 288 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 FERMT3Q86UX7 667 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 EXOC8Q8IYI6 725 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 RNF149Q8NC42 400 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 IGSF21Q96ID5 467 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 CPB2Q96IY4 423 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 FBXL18Q96ME1 805 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 EIF2AK1Q9BQI3 630 aaKnown RBP14.4□□□□□ -0.1
TREX1-203ENST00000456089 TRAIPQ9BWF2 469 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 ZBP1Q9H171 429 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 TTC12Q9H892 705 aaPredicted RBP14.4□□□□□ -0.1
TREX1-203ENST00000456089 SMC3Q9UQE7 1217 aa14.4□□□□□ -0.1
TREX1-203ENST00000456089 ARIH1Q9Y4X5 557 aaPredicted RBP14.4□□□□□ -0.1
TREX1-203ENST00000456089 POMCP01189 267 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 RFC5P40937 340 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 RAB27AP51159 221 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 RARS2Q5T160 578 aaKnown RBP14.39□□□□□ -0.11
TREX1-203ENST00000456089 MCTP1Q6DN14 999 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 TRIM67Q6ZTA4 783 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 NOSTRINQ8IVI9 506 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 ASAP3Q8TDY4 903 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 CCDC43Q96MW1 224 aaKnown RBP14.39□□□□□ -0.11
TREX1-203ENST00000456089 MTRQ99707 1265 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 EIF2AQ9BY44 585 aaKnown RBP14.39□□□□□ -0.11
TREX1-203ENST00000456089 BACH2Q9BYV9 841 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 POMKQ9H5K3 350 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 ZSWIM4Q9H7M6 989 aa14.39□□□□□ -0.11
TREX1-203ENST00000456089 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 ZNF623O75123 536 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 SKIP12755 728 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 ORC2Q13416 577 aaPredicted RBP14.38□□□□□ -0.11
TREX1-203ENST00000456089 ZNF174Q15697 407 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 SRGAP1Q7Z6B7 1085 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 DDX53Q86TM3 631 aaKnown RBP14.38□□□□□ -0.11
TREX1-203ENST00000456089 ALYREFQ86V81 257 aaKnown RBP14.38□□□□□ -0.11
TREX1-203ENST00000456089 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
TREX1-203ENST00000456089 SMG8Q8ND04 991 aaKnown RBP14.38□□□□□ -0.11
TREX1-203ENST00000456089 URGCPQ8TCY9 931 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 PIGOQ8TEQ8 1089 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 CASP10Q92851 521 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 PBXIP1Q96AQ6 731 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 APOL6Q9BWW8 343 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 RSAD1Q9HA92 442 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 HES2Q9Y543 173 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 TRIP11Q15643 1979 aa14.38□□□□□ -0.11
TREX1-203ENST00000456089 POTEMA6NI47 508 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 F8W810 466 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 TSPAN1O60635 241 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 CD2BP2O95400 341 aaKnown RBP14.37□□□□□ -0.11
TREX1-203ENST00000456089 CTSAP10619 480 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 GJB2P29033 226 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 TRAPPC10P48553 1259 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 CAPSQ13938 189 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 TTC38Q5R3I4 469 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 IER5LQ5T953 404 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 MAEAQ7L5Y9 396 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 MRPL10Q7Z7H8 261 aaKnown RBP14.37□□□□□ -0.11
TREX1-203ENST00000456089 TMEM87AQ8NBN3 555 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 TCP11Q8WWU5 503 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 PGBD4Q96DM1 585 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 TMEM60Q9H2L4 133 aa14.37□□□□□ -0.11
TREX1-203ENST00000456089 SMOC2Q9H3U7 446 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms