RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 IRF1P10914 325 aa10.76□□□□□ -0.69
SCN5A-210ENST00000455624 COPB2P35606 906 aa10.76□□□□□ -0.69
SCN5A-210ENST00000455624 OSBP2Q969R2 916 aa10.76□□□□□ -0.69
SCN5A-210ENST00000455624 OTULINQ96BN8 352 aa10.76□□□□□ -0.69
SCN5A-210ENST00000455624 KIF12Q96FN5 646 aa10.76□□□□□ -0.69
SCN5A-210ENST00000455624 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.76□□□□□ -0.69
SCN5A-210ENST00000455624 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
SCN5A-210ENST00000455624 PER1O15534 1290 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 SERPIND1P05546 499 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 HSPA1AP0DMV8 641 aaKnown RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 HSPA1BP0DMV9 641 aaKnown RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 CYP2D6P10635 497 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 SSTR3P32745 418 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ZNF564Q8TBZ8 553 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ING2Q9H160 280 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 DOLKQ9UPQ8 538 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 A8MXQ7 604 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 PSMC1P62191 440 aaKnown RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 RNF135Q8IUD6 432 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 GPD1LQ8N335 351 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 OR9Q1Q8NGQ5 310 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 OTUB1Q96FW1 271 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 GPBP1L1Q9HC44 474 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 RNF146Q9NTX7 359 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 PTCH1Q13635 1447 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 MAP4P27816 1152 aaKnown RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 GCLMP48507 274 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 RAP1GDS1P52306 607 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 RASGRF1Q13972 1273 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 KRT31Q15323 416 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 PKN3Q6P5Z2 889 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 C16orf87Q6PH81 154 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 STX19Q8N4C7 294 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 WDR48Q8TAF3 677 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 PLEKHA5Q9HAU0 1116 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 TJP2Q9UDY2 1190 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 A0A087WUV0 522 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ZSCAN9O15535 394 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ALDH1A1P00352 501 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 MED21Q13503 144 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 AP1ARQ63HQ0 302 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 RMDN1Q96DB5 314 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ZNF560Q96MR9 790 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 TDRD3Q9H7E2 651 aaKnown RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 TMEM260Q9NX78 707 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ASB14A6NK59 587 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ZNF500O60304 480 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 PRAMEP78395 509 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 PKP1Q13835 747 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 NFU1Q9UMS0 254 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ST8SIA6P61647 398 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 RPAINQ86UA6 219 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 LBHD1Q9BQE6 289 aaPredicted RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 PITPNM3Q9BZ71 974 aa10.75□□□□□ -0.69
SCN5A-210ENST00000455624 RRP15Q9Y3B9 282 aaKnown RBP10.75□□□□□ -0.69
SCN5A-210ENST00000455624 ZFXP17010 805 aaPredicted RBP10.74□□□□□ -0.69
SCN5A-210ENST00000455624 SNX17Q15036 470 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 XXYLT1Q8NBI6 393 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 AATKQ6ZMQ8 1374 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 ZNF189O75820 626 aaPredicted RBP10.74□□□□□ -0.69
SCN5A-210ENST00000455624 POLE2P56282 527 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 PGBD3Q8N328 593 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 ZNF513Q8N8E2 541 aaPredicted RBP10.74□□□□□ -0.69
SCN5A-210ENST00000455624 ZNF668Q96K58 619 aaPredicted RBP10.74□□□□□ -0.69
SCN5A-210ENST00000455624 ACAD9Q9H845 621 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 PCSK1NQ9UHG2 260 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 SPON2Q9BUD6 331 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 RASA4BC9J798 803 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 RASA4O43374 803 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 KCNA2P16389 499 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 IFNAR1P17181 557 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 GFPT1Q06210 699 aaPredicted RBP10.74□□□□□ -0.69
SCN5A-210ENST00000455624 MMS22LQ6ZRQ5 1243 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 MTIF3Q9H2K0 278 aaKnown RBP10.74□□□□□ -0.69
SCN5A-210ENST00000455624 RPAP3Q9H6T3 665 aaPredicted RBP10.74□□□□□ -0.69
SCN5A-210ENST00000455624 ADA2Q9NZK5 511 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 PMS2P54278 862 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 MORF4L2Q15014 288 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 ALKBH5Q6P6C2 394 aaKnown RBP10.74□□□□□ -0.69
SCN5A-210ENST00000455624 TTC39CQ8N584 583 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 PIGBQ92521 554 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 PPP2R3CQ969Q6 453 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 PLEKHG2Q9H7P9 1386 aa10.74□□□□□ -0.69
SCN5A-210ENST00000455624 GYG2O15488 501 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 MMEP08473 750 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 PFKFB3Q16875 520 aaPredicted RBP10.73□□□□□ -0.69
SCN5A-210ENST00000455624 DACH2Q96NX9 599 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 PLEKHF1Q96S99 279 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 C11orf70Q9BRQ4 267 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 COL15A1P39059 1388 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 E9PMD0 336 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 RRM2BQ7LG56 351 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 DHX35Q9H5Z1 703 aaKnown RBP10.73□□□□□ -0.69
SCN5A-210ENST00000455624 LSM7Q9UK45 103 aaKnown RBP10.73□□□□□ -0.69
SCN5A-210ENST00000455624 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 MROH7-TTC4A0A0A0MT08 1334 aa10.73□□□□□ -0.69
SCN5A-210ENST00000455624 POTEMA6NI47 508 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms