RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 ST18O60284 1047 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 GFRA3O60609 400 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 HOXA11P31270 313 aaPredicted RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 QARSP47897 775 aaKnown RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 FXR2P51116 673 aaKnown RBP eCLIP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 RNASELQ05823 741 aaKnown RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 STK3Q13188 491 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 GIT2Q14161 759 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 BMS1Q14692 1282 aaKnown RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 LETM2Q2VYF4 491 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 UBXN11Q5T124 520 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 MRPL10Q7Z7H8 261 aaKnown RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 ATOH1Q92858 354 aaPredicted RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 ZNF274Q96GC6 653 aaPredicted RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 DHX33Q9H6R0 707 aaKnown RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 LIMD1Q9UGP4 676 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 DBR1Q9UK59 544 aaKnown RBP9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 KCNJ14Q9UNX9 436 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 USTQ9Y2C2 406 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 ZNF292O60281 2723 aa9.89□□□□□ -0.83
DEPDC1B-202ENST00000453022 CARNS1A5YM72 827 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 DTNBO60941 627 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 LILRB3O75022 631 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 REC8O95072 547 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 CNPP09543 421 aaKnown RBP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 CLCN4P51793 760 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 ATAT1Q5SQI0 421 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 GALNT17Q6IS24 598 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 KRT25Q7Z3Z0 450 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 GPR149Q86SP6 731 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 CABP7Q86V35 215 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 FAM177A1Q8N128 213 aaPredicted RBP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 SPDYE1Q8NFV5 336 aaPredicted RBP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 PRPF31Q8WWY3 499 aaKnown RBP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 HAS1Q92839 578 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 TMEM143Q96AN5 459 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 PGBD4Q96DM1 585 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 JPH2Q9BR39 696 aaPredicted RBP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 PHF20Q9BVI0 1012 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 SFXN1Q9H9B4 322 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 RSAD1Q9HA92 442 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 GJB4Q9NTQ9 266 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 DOCK6Q96HP0 2047 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 CNTNAP2Q9UHC6 1331 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 CPLX1O14810 134 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 POMCP01189 267 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 SSBP05455 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 SRGAP2CP0DJJ0 459 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 NUBP1P53384 320 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 SPIRE1Q08AE8 756 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 LAMTOR4Q0VGL1 99 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 CWF19L1Q69YN2 538 aaKnown RBP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 SRGAP1Q7Z6B7 1085 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 PPFIBP1Q86W92 1011 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 SMG8Q8ND04 991 aaKnown RBP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 URGCPQ8TCY9 931 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 PSPC1Q8WXF1 523 aaKnown RBP9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 CEP170P1Q96L14 293 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 KLHL5Q96PQ7 755 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 LXNQ9BS40 222 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 MARCH5Q9NX47 278 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 CYP46A1Q9Y6A2 500 aa9.88□□□□□ -0.83
DEPDC1B-202ENST00000453022 MYH15Q9Y2K3 1946 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 PROB1E7EW31 1015 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 NRP1O14786 923 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 ZBTB39O15060 712 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 N4BP1O75113 896 aaKnown RBP9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 EFEMP2O95967 443 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 P4HBP07237 508 aaKnown RBP9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 NCLP19338 710 aaKnown RBP9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 RFC5P40937 340 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 SCRN1Q12765 414 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 EMC2Q15006 297 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 EARS2Q5JPH6 523 aaKnown RBP9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 ASTLQ6HA08 431 aaPredicted RBP9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 PPP4R3AQ6IN85 833 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 ASCL5Q7RTU5 278 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 TAS1R1Q7RTX1 841 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 NEK8Q86SG6 692 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 FERMT3Q86UX7 667 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 C4orf19Q8IY42 314 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 RNF168Q8IYW5 571 aaPredicted RBP9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 FAM20AQ96MK3 541 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 TMEM175Q9BSA9 504 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 TM6SF1Q9BZW5 370 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 IRF2BPLQ9H1B7 796 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 SLKQ9H2G2 1235 aaPredicted RBP9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 XPNPEP1Q9NQW7 623 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 RGL1Q9NZL6 768 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 PPME1Q9Y570 386 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 VWA8A3KMH1 1905 aa9.87□□□□□ -0.83
DEPDC1B-202ENST00000453022 STK36Q9NRP7 1315 aa9.86□□□□□ -0.83
DEPDC1B-202ENST00000453022 DNAH14Q0VDD8 3507 aa9.86□□□□□ -0.83
DEPDC1B-202ENST00000453022 CCDC194A0A1B0GVG4 234 aa9.86□□□□□ -0.83
DEPDC1B-202ENST00000453022 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms