RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 GPR88Q9GZN0 384 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 ATP6V0A4Q9HBG4 840 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 ZNF302Q9NR11 478 aa12.78□□□□□ -0.36
VTA1-203ENST00000452973 KCNK3O14649 394 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 STBD1O95210 358 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 SUPT20HL2P0C7V6 817 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 TNFAIP3P21580 790 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 GALCP54803 685 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 TAF3Q5VWG9 929 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.36
VTA1-203ENST00000452973 LMO3Q8TAP4 145 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 SENP7Q9BQF6 1050 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 TIPINQ9BVW5 301 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 TAS2R14Q9NYV8 317 aa12.77□□□□□ -0.36
VTA1-203ENST00000452973 LRRIQ4A6NIV6 560 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 DKC1O60832 514 aaKnown RBP eCLIP12.77□□□□□ -0.37
VTA1-203ENST00000452973 YBX3P16989 372 aaKnown RBP eCLIP12.77□□□□□ -0.371e-7■■■■□ 23.4
VTA1-203ENST00000452973 MARK3P27448 753 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 LY6KQ17RY6 165 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 RPGRIP1Q96KN7 1286 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 ASCC2Q9H1I8 757 aaPredicted RBP12.77□□□□□ -0.37
VTA1-203ENST00000452973 OSGEPQ9NPF4 335 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 CHORDC1Q9UHD1 332 aaPredicted RBP12.77□□□□□ -0.37
VTA1-203ENST00000452973 ATP4AP20648 1035 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 SMC1AQ14683 1233 aaKnown RBP12.77□□□□□ -0.37
VTA1-203ENST00000452973 XKR3Q5GH77 459 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 CCDC70Q6NSX1 233 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 SLC39A4Q6P5W5 647 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 MAP4K3Q8IVH8 894 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 MCPH1Q8NEM0 835 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 TAF4BQ92750 862 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 ZNF408Q9H9D4 720 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 RBM12Q9NTZ6 932 aaKnown RBP12.77□□□□□ -0.37
VTA1-203ENST00000452973 FAM53CQ9NYF3 392 aa12.77□□□□□ -0.37
VTA1-203ENST00000452973 SOWAHBA6NEL2 793 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 UBA1P22314 1058 aaKnown RBP12.76□□□□□ -0.37
VTA1-203ENST00000452973 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 EMC2Q15006 297 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 DAAM2Q86T65 1068 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 DMGDHQ9UI17 866 aaKnown RBP12.76□□□□□ -0.37
VTA1-203ENST00000452973 PCDHGC5Q9Y5F6 944 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 NFASCO94856 1347 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 HARSP12081 509 aaKnown RBP12.76□□□□□ -0.37
VTA1-203ENST00000452973 PRLRP16471 622 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 NF2P35240 595 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 RPS6KA1Q15418 735 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 CFAP221Q4G0U5 840 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 C10orf76Q5T2E6 689 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 MEI1Q5TIA1 1274 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 HDXQ7Z353 690 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 DNERQ8NFT8 737 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 SEMA4DQ92854 862 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 PI4K2AQ9BTU6 479 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 ST6GALNAC4Q9H4F1 302 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 TXNRD2Q9NNW7 524 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 L1RE1Q9UN81 338 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 LOXHD1Q8IVV2 1947 aa12.76□□□□□ -0.37
VTA1-203ENST00000452973 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
VTA1-203ENST00000452973 MYBL2P10244 700 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 OAS2P29728 719 aaKnown RBP12.75□□□□□ -0.37
VTA1-203ENST00000452973 ACOT2P49753 483 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 LIG4P49917 911 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 RIOX2Q8IUF8 465 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 CDCA5Q96FF9 252 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 SYT17Q9BSW7 474 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 PDE11AQ9HCR9 933 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 SYNGAP1Q96PV0 1343 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 STAM2O75886 525 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 GGPS1O95749 300 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 GYS2P54840 703 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 MKRN3Q13064 507 aaKnown RBP12.75□□□□□ -0.37
VTA1-203ENST00000452973 Q3C1V9 767 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 PEX26Q7Z412 305 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 C12orf56Q8IXR9 622 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 ANKRD13AQ8IZ07 590 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 PARD3BQ8TEW8 1205 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 HNRNPLLQ8WVV9 542 aaKnown RBP12.75□□□□□ -0.37
VTA1-203ENST00000452973 CTNNBL1Q8WYA6 563 aaPredicted RBP12.75□□□□□ -0.37
VTA1-203ENST00000452973 ZNF668Q96K58 619 aaPredicted RBP12.75□□□□□ -0.37
VTA1-203ENST00000452973 ANKFY1Q9P2R3 1169 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 FBXO40Q9UH90 709 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 N4BP1O75113 896 aaKnown RBP12.75□□□□□ -0.37
VTA1-203ENST00000452973 PHACTR2O75167 634 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 CALCAP01258 141 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 OATP04181 439 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 CCDC172P0C7W6 258 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 CASP8Q14790 479 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 EPC2Q52LR7 807 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 SEZ6Q53EL9 994 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 WDR93Q6P2C0 686 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 TRIM50Q86XT4 487 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 ERO1BQ86YB8 467 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 PROCA1Q8NCQ7 364 aaPredicted RBP12.75□□□□□ -0.37
VTA1-203ENST00000452973 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
VTA1-203ENST00000452973 TPCN2Q8NHX9 752 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms