RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 LAMB1P07942 1786 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 POTEJP0CG39 1038 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 ACOT2P49753 483 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 CBWD6Q4V339 395 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 CBWD3Q5JTY5 395 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 CBWD5Q5RIA9 395 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 ALS2CLQ60I27 953 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 DCAF15Q66K64 600 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 TCP11Q8WWU5 503 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 CPA5Q8WXQ8 436 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 VTI1AQ96AJ9 217 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 INTS2Q9H0H0 1204 aaKnown RBP12.03□□□□□ -0.48
DDR1-239ENST00000452441 KCNH7Q9NS40 1196 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 MTRF1LQ9UGC7 380 aaKnown RBP12.03□□□□□ -0.48
DDR1-239ENST00000452441 TNRC6CQ9HCJ0 1690 aaKnown RBP12.03□□□□□ -0.48
DDR1-239ENST00000452441 WDR91A4D1P6 747 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 WNT10BO00744 389 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 PIAS1O75925 651 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 HNRNPH3P31942 346 aaKnown RBP12.03□□□□□ -0.48
DDR1-239ENST00000452441 NAB2Q15742 525 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 MICALCLQ6ZW33 695 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 TRIM59Q8IWR1 403 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.03□□□□□ -0.48
DDR1-239ENST00000452441 DEPTORQ8TB45 409 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 RNF25Q96BH1 459 aaPredicted RBP12.03□□□□□ -0.48
DDR1-239ENST00000452441 APOL6Q9BWW8 343 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 MTUS1Q9ULD2 1270 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 FOXO6A8MYZ6 492 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 SHOX2O60902 331 aaPredicted RBP12.02□□□□□ -0.48
DDR1-239ENST00000452441 EYA4O95677 639 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 PRLRP16471 622 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 FERP16591 822 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 FLT3P36888 993 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 LLGL2Q6P1M3 1020 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 ZSWIM2Q8NEG5 633 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 ATG4AQ8WYN0 398 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 UNC45AQ9H3U1 944 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 PNMA2Q9UL42 364 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 PPP1R9AQ9ULJ8 1098 aa12.02□□□□□ -0.48
DDR1-239ENST00000452441 SMARCA1P28370 1054 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 CAP2P40123 477 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 FMO5P49326 533 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 SEMA3FQ13275 785 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 WDR44Q5JSH3 913 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 ZNF365Q70YC5 407 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 PALB2Q86YC2 1186 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 SYCE1Q8N0S2 351 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 CEP63Q96MT8 703 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 ELAC2Q9BQ52 826 aaKnown RBP12.02□□□□□ -0.49
DDR1-239ENST00000452441 JPH2Q9BR39 696 aaPredicted RBP12.02□□□□□ -0.49
DDR1-239ENST00000452441 IMPG2Q9BZV3 1241 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 FEM1BQ9UK73 627 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 INO80B-WBP1J3KQ70 363 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 GAP43P17677 238 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 NT5C2P49902 561 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 C15orf52Q6ZUT6 534 aaKnown RBP12.02□□□□□ -0.49
DDR1-239ENST00000452441 B4GALNT4Q76KP1 1039 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 ARFGAP2Q8N6H7 521 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 C18orf8Q96DM3 657 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 NLRP4Q96MN2 994 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 INO80BQ9C086 356 aaPredicted RBP12.02□□□□□ -0.49
DDR1-239ENST00000452441 ANAPC7Q9UJX3 599 aa12.02□□□□□ -0.49
DDR1-239ENST00000452441 DENND3A2RUS2 1198 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 CSDE1O75534 798 aaKnown RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 EGFRP00533 1210 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 RRP1BQ14684 758 aaKnown RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 DCUN1D2Q6PH85 259 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 USP38Q8NB14 1042 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 ARHGEF26Q96DR7 871 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 TAF1DQ9H5J8 278 aaPredicted RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 NXF1Q9UBU9 619 aaKnown RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 AJAP1Q9UKB5 411 aaPredicted RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 NR2E1Q9Y466 385 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 GRIN2DO15399 1336 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 F5H423 210 aaPredicted RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 GJB6O95452 261 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 QARSP47897 775 aaKnown RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 HGSNATQ68CP4 663 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 RUFY4Q6ZNE9 571 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 FAM47EQ6ZV65 393 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 PRUNE1Q86TP1 453 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 CPNE8Q86YQ8 564 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 CBWD2Q8IUF1 395 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 DCPSQ96C86 337 aaKnown RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 C11orf70Q9BRQ4 267 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 RNF181Q9P0P0 153 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 HACL1Q9UJ83 578 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 CLDN3O15551 220 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 ITIH3Q06033 890 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 HAUS6Q7Z4H7 955 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 THNSL1Q8IYQ7 743 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 RNF10Q8N5U6 811 aaKnown RBP12.01□□□□□ -0.49
DDR1-239ENST00000452441 AZI2Q9H6S1 392 aa12.01□□□□□ -0.49
DDR1-239ENST00000452441 SSU72P8A0A1W2PR75 194 aa12□□□□□ -0.49
DDR1-239ENST00000452441 NOL4O94818 638 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms