RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 TSPAN1O60635 241 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 PPP1R37O75864 691 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 BAIAP3O94812 1187 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 RHOBTB3O94955 611 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 ACRP10323 421 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 ACTN1P12814 892 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 AXLP30530 894 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 EPHB4P54760 987 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.31
LINC00339-205ENST00000452322 STRN3Q13033 797 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 PSMD2Q13200 908 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 STXBP4Q6ZWJ1 553 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 C16orf59Q7L2K0 433 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 TAS1R3Q7RTX0 852 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 SMARCE1Q969G3 411 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 HVCN1Q96D96 273 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 GSDMAQ96QA5 445 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 STRA6Q9BX79 667 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 NUP62CLQ9H1M0 184 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 TMX1Q9H3N1 280 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 CHST12Q9NRB3 414 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 RMND1Q9NWS8 449 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 TBC1D7Q9P0N9 293 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 PCDHA5Q9Y5H7 936 aa13.08□□□□□ -0.31
LINC00339-205ENST00000452322 CNTNAP2Q9UHC6 1331 aa13.08□□□□□ -0.32
LINC00339-205ENST00000452322 ABHD14A-ACY1A0A1B0GW23 586 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 EFCAB14O75071 495 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 GCNT3O95395 438 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 FGBP02675 491 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 SARSP49591 514 aaKnown RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 IKBKEQ14164 716 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 CAMK4Q16566 473 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 TCTN1Q2MV58 587 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 TMEM240Q5SV17 173 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 NT5DC1Q5TFE4 455 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 ZNF365Q70YC5 407 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 MAP4K3Q8IVH8 894 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 HPS3Q969F9 1004 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 CCDC51Q96ER9 411 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 MRPL4Q9BYD3 311 aaKnown RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 FGFBP2Q9BYJ0 223 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 TBX20Q9UMR3 447 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 MICAL3Q7RTP6 2002 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 EIF3DO15371 548 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 B4GALT5O43286 388 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 PIGRP01833 764 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 EDN1P05305 212 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 MYBP10242 640 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 ARF4P18085 180 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 HOXA11P31270 313 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 CASP5P51878 434 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 DSC3Q14574 896 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 ZC2HC1CQ53FD0 456 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 NOTUMQ6P988 496 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 ZPBP2Q6X784 338 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 EPM2AIP1Q7L775 607 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 KIAA0895Q8NCT3 520 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 LINC01599Q8WXQ3 324 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 ERCC4Q92889 916 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 TRAIPQ9BWF2 469 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-205ENST00000452322 SLC39A2Q9NP94 309 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
LINC00339-205ENST00000452322 UBE4BO95155 1302 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 RANBP2P49792 3224 aaKnown RBP13.06□□□□□ -0.32
LINC00339-205ENST00000452322 A0A1B0GUA9 196 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 RBAK-RBAKDNI3L0D1 243 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 MGEA5O60502 916 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 BMP8BP34820 402 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 STK4Q13043 487 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 BMT2Q1RMZ1 405 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 KLHL40Q2TBA0 621 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 OTOP2Q7RTS6 562 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 GLIS3Q8NEA6 775 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 ZNF507Q8TCN5 953 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 HERVK_113Q902F9 699 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 ACO2Q99798 780 aaKnown RBP13.06□□□□□ -0.32
LINC00339-205ENST00000452322 ADAM2Q99965 735 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 GTPBP4Q9BZE4 634 aaKnown RBP13.06□□□□□ -0.32
LINC00339-205ENST00000452322 UBE2OQ9C0C9 1292 aaKnown RBP13.06□□□□□ -0.32
LINC00339-205ENST00000452322 MTIF3Q9H2K0 278 aaKnown RBP13.06□□□□□ -0.32
LINC00339-205ENST00000452322 TMEM206Q9H813 350 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 RGS18Q9NS28 235 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 C1orf112Q9NSG2 853 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 EXOC7Q9UPT5 735 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 TNFSF13BQ9Y275 285 aa13.06□□□□□ -0.32
LINC00339-205ENST00000452322 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-205ENST00000452322 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
LINC00339-205ENST00000452322 ENPP3O14638 875 aa13.05□□□□□ -0.32
LINC00339-205ENST00000452322 HNRNPDLO14979 420 aaKnown RBP13.05□□□□□ -0.32
LINC00339-205ENST00000452322 N4BP3O15049 544 aa13.05□□□□□ -0.32
LINC00339-205ENST00000452322 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
LINC00339-205ENST00000452322 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms