RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RARRES1P49788 294 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 ERVFC1P60507 584 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 COL19A1Q14993 1142 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 KCNT2Q6UVM3 1135 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 MAEAQ7L5Y9 396 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 SRGAP1Q7Z6B7 1085 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 CATSPER3Q86XQ3 398 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 LRRC43Q8N309 656 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 KRI1Q8N9T8 703 aaKnown RBP18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 ASAP3Q8TDY4 903 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 FAM105AQ9NUU6 356 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 GRXCR2A6NFK2 248 aa18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 GAS2O43903 313 aaKnown RBP18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 USO1O60763 962 aaKnown RBP18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 NRIP1P48552 1158 aa18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 CTC1Q2NKJ3 1217 aa18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 CHAMP1Q96JM3 812 aa18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 ZNF558Q96NG5 402 aa18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 AGPAT5Q9NUQ2 364 aa18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 INPP5FQ9Y2H2 1132 aa18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 SRPRBQ9Y5M8 271 aaKnown RBP18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 STK24Q9Y6E0 443 aa18.89■□□□□ 0.61
PRPF40A-204ENST00000450303 NT5C1B-RDH14C9J2C7 533 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 PER2O15055 1255 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 NCK2O43639 380 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 CUTAO60888 179 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 DGAT1O75907 488 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 UBE3AQ05086 875 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 ADAM15Q13444 863 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 SKOR2Q2VWA4 1001 aaPredicted RBP18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 TRAIPQ9BWF2 469 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 GDPD2Q9HCC8 539 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 TUFT1Q9NNX1 390 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 CD320Q9NPF0 282 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 TLR9Q9NR96 1032 aa18.88■□□□□ 0.61
PRPF40A-204ENST00000450303 BDP1A6H8Y1 2624 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 VWA3AA6NCI4 1184 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 TBX10O75333 385 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 SKIP12755 728 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 HOXA11P31270 313 aaPredicted RBP18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 ARL2P36404 184 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 LONP1P36776 959 aaKnown RBP18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.615e-9■■■□□ 17
PRPF40A-204ENST00000450303 PTENP60484 403 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 CAPSQ13938 189 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 PDIA5Q14554 519 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 MXD4Q14582 209 aaPredicted RBP18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 UBXN11Q5T124 520 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 PLPP4Q5VZY2 271 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 POTEGQ6S5H5 508 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 TMEM87AQ8NBN3 555 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 MRPS27Q92552 414 aaKnown RBP18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 PPP2R3CQ969Q6 453 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 CPB2Q96IY4 423 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 POLR3CQ9BUI4 534 aaPredicted RBP18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 POLR3FQ9H1D9 316 aaPredicted RBP18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 TLE6Q9H808 572 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 GPRC5CQ9NQ84 441 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 FBXO2Q9UK22 296 aaPredicted RBP18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 PCDHB2Q9Y5E7 798 aa18.87■□□□□ 0.61
PRPF40A-204ENST00000450303 INO80B-WBP1J3KQ70 363 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 ZNF623O75123 536 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 OFD1O75665 1012 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 ERLIN2O94905 339 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 XRCC6P12956 609 aaKnown RBP eCLIP18.86■□□□□ 0.616e-6■■■■■ 31.4
PRPF40A-204ENST00000450303 GLRA2P23416 452 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 NDUFV1P49821 464 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 BCAR1P56945 870 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 PLCB3Q01970 1234 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 TFDP1Q14186 410 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 ADALQ6DHV7 355 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 FAM178BQ8IXR5 827 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 ERMNQ8TAM6 284 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 AK8Q96MA6 479 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 NACC1Q96RE7 527 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 MRPL9Q9BYD2 267 aaKnown RBP18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 SPG21Q9NZD8 308 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 PUF60Q9UHX1 559 aaKnown RBP18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 PCDHA7Q9UN72 937 aa18.86■□□□□ 0.61
PRPF40A-204ENST00000450303 FSCN2O14926 492 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 RPA1P27694 616 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 RAB27AP51159 221 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 RBM10P98175 930 aaKnown RBP18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 KRT17Q04695 432 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 PUS10Q3MIT2 529 aaKnown RBP18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 NOMO2Q5JPE7 1267 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 GLB1LQ6UWU2 654 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 AGMOQ6ZNB7 445 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 SLC39A11Q8N1S5 342 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 EFHBQ8N7U6 833 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 KHSRPQ92945 711 aaKnown RBP eCLIP18.85■□□□□ 0.611e-8■■□□□ 12.7
PRPF40A-204ENST00000450303 PGBD4Q96DM1 585 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 TCF25Q9BQ70 676 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 GBP3Q9H0R5 595 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 ENTPD7Q9NQZ7 604 aa18.85■□□□□ 0.61
PRPF40A-204ENST00000450303 TSPAN1O60635 241 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 ZC3H11AO75152 810 aaKnown RBP eCLIP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 PRPF40AO75400 957 aaKnown RBP18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 PPM1AP35813 382 aa18.84■□□□□ 0.61
PRPF40A-204ENST00000450303 TXLNAP40222 546 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms