RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 H0Y3Z8 333 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SLC26A4O43511 780 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 EXOC3O60645 756 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SNX2O60749 519 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SASH3O75995 380 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 HOXB7P09629 217 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PYGMP11217 842 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PORP16435 677 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 PSMC3P17980 439 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 RFX1P22670 979 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 MARCKSP29966 332 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 STIP1P31948 543 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 PTDSS1P48651 473 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 KIF11P52732 1056 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 MRPS9P82933 396 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 ITGA7Q13683 1181 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ACVR2BQ13705 512 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 NAA30Q147X3 362 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 MAN2A1Q16706 1144 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SYCE2Q6PIF2 218 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 DTHD1Q6ZMT9 781 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 GPBP1Q86WP2 473 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 C2CD5Q86YS7 1000 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 SPATA4Q8NEY3 305 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 GIPC2Q8TF65 315 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TP53INP1Q96A56 240 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 KIFC2Q96AC6 838 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 RBM17Q96I25 401 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 PNKPQ96T60 521 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 MLPHQ9BV36 600 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 OSBPL6Q9BZF3 934 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 UBE2OQ9C0C9 1292 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 EPC1Q9H2F5 836 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 FOXP1Q9H334 677 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 CCDC59Q9P031 241 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 CEP72Q9P209 647 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 STX18Q9P2W9 335 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 SUN2Q9UH99 717 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ZNF180Q9UJW8 692 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 STRIP2Q9ULQ0 834 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ZNF652Q9Y2D9 606 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 COMMD10Q9Y6G5 202 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 NOS1P29475 1434 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 MST1RQ04912 1400 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SAGE2PA6NJ88 616 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SPDYE3A6NKU9 549 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TMEM114B3SHH9 223 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 BTBD19C9JJ37 291 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 POLR2DO15514 142 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 ATP9BO43861 1147 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 DNAJC6O75061 913 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PHF2O75151 1096 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 CD2BP2O95400 341 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 ASMTLO95671 621 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TTLL1O95922 423 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PAEPP09466 180 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 H2AFZP0C0S5 128 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 UQCRFS1P1P0C7P4 283 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PRR29P0C7W0 189 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 FCGR1AP12314 374 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 VAV1P15498 845 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ABCB4P21439 1286 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TMOD1P28289 359 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 CDC27P30260 824 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 IL12RB1P42701 662 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 IFNAR2P48551 515 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 CD97P48960 835 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 CCNG1P51959 295 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ALDH18A1P54886 795 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 MCL1Q07820 350 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 FLIIQ13045 1269 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TOP3AQ13472 1001 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 SQLEQ14534 574 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TMED2Q15363 201 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 GEN1Q17RS7 908 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ADCK5Q3MIX3 580 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TWF2Q6IBS0 349 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 H2AFVQ71UI9 128 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 CDH24Q86UP0 819 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 NELFCDQ8IXH7 590 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 MICALL2Q8IY33 904 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 GALNT6Q8NCL4 622 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 LINC00301Q8NCQ3 95 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SYN2Q92777 582 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 HPS3Q969F9 1004 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 POP5Q969H6 163 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 OTULINQ96BN8 352 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 RPS6KC1Q96S38 1066 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 EPAS1Q99814 870 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 CDH19Q9H159 772 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 GLT8D2Q9H1C3 349 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 MADDQ8WXG6 1647 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 AK9Q5TCS8 1911 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TRPM2O94759 1503 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 A0A087WXM4 84 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 CCDC78A2IDD5 438 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 TTLL13PA6NNM8 815 aa2.34□□□□□ -2.04
USP53-202ENST00000450251 RNF113AO15541 343 aaKnown RBP2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms