RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 Q7L0L9 218 aa14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 APBB1IPQ7Z5R6 666 aaPredicted RBP14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 MRPL10Q7Z7H8 261 aaKnown RBP14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 ZNF598Q86UK7 904 aaKnown RBP14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 HACE1Q8IYU2 909 aa14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 IQUBQ8NA54 791 aa14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 BSNDQ8WZ55 320 aa14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 TMEM117Q9H0C3 514 aa14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 UBN1Q9NPG3 1134 aa14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 KMT5AQ9NQR1 393 aa14.41□□□□□ -0.1
SNRNP27-203ENST00000450162 LCHNA4D1U4 455 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 RB1P06400 928 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 ARF4P18085 180 aaPredicted RBP14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 ZNF131P52739 623 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 AMPD3Q01432 767 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 PRPF4BQ13523 1007 aaKnown RBP14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 GIT2Q14161 759 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 DHX8Q14562 1220 aaKnown RBP14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 GRIN2CQ14957 1233 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 NAALADL2Q58DX5 795 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 RESP18Q5W5W9 173 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 SLC27A1Q6PCB7 646 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 SHC4Q6S5L8 630 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 ABI1Q8IZP0 508 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 LEO1Q8WVC0 666 aaPredicted RBP14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 CLP1Q92989 425 aaKnown RBP14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 GAS2L1Q99501 681 aaPredicted RBP14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 CDX2Q99626 313 aaPredicted RBP14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 REEP2Q9BRK0 252 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 PLVAPQ9BX97 442 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 CCDC113Q9H0I3 377 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 MAGEF1Q9HAY2 307 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 PARVGQ9HBI0 331 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 ARHGAP28Q9P2N2 729 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 PCDHB2Q9Y5E7 798 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 CNTNAP2Q9UHC6 1331 aa14.4□□□□□ -0.1
SNRNP27-203ENST00000450162 C5orf67F2Z3F1 127 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 N4BP3O15049 544 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 TBCAO75347 108 aaKnown RBP14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 FAM13AO94988 1023 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 PRKCBP05771 671 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 CMA1P23946 247 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 RAD51AP2Q09MP3 1159 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 TMEM192Q8IY95 271 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 LRRC15Q8TF66 581 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 FAM161BQ96MY7 647 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 GUCD1Q96NT3 240 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 ADPGKQ9BRR6 497 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 MRPL9Q9BYD2 267 aaKnown RBP14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 TRIM6Q9C030 488 aaPredicted RBP14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 TNMDQ9H2S6 317 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 AAASQ9NRG9 546 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 LMCD1Q9NZU5 365 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 SEL1LQ9UBV2 794 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 STXBP5LQ9Y2K9 1186 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 PTPRSQ13332 1948 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 MYH15Q9Y2K3 1946 aa14.39□□□□□ -0.11
SNRNP27-203ENST00000450162 TBKBP1A7MCY6 615 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 SFI1A8K8P3 1242 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 ATF7P17544 494 aaPredicted RBP14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 POU3F3P20264 500 aaPredicted RBP14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 BMPR1AP36894 532 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 STRN3Q13033 797 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 CSPP1Q1MSJ5 1256 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 UBXN11Q5T124 520 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 GLB1LQ6UWU2 654 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 MYCT1Q8N699 235 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 PDILTQ8N807 584 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 TMEM161BQ8NDZ6 487 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 SPDYE1Q8NFV5 336 aaPredicted RBP14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 ARNTL2Q8WYA1 636 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 DDX12PQ92771 950 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 MRPL4Q9BYD3 311 aaKnown RBP14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 PANK2Q9BZ23 570 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 POLD4Q9HCU8 107 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 KANSL3Q9P2N6 904 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 USP25Q9UHP3 1055 aa14.38□□□□□ -0.11
SNRNP27-203ENST00000450162 ZMYM2Q9UBW7 1377 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 B4GALT5O43286 388 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 TRAK2O60296 914 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 ARHGEF15O94989 841 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 MAPTP10636 758 aaKnown RBP14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 FGFR1P11362 822 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 ITGA4P13612 1032 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 GAP43P17677 238 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 NCKAP1LP55160 1127 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 E2F4Q16254 413 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 TMEM132AQ24JP5 1023 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 EPC2Q52LR7 807 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 HAUS6Q7Z4H7 955 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 LRRC43Q8N309 656 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 RNF169Q8NCN4 708 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 FBXO22Q8NEZ5 403 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 P2RX5Q93086 422 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 CPB2Q96IY4 423 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 CASD1Q96PB1 797 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 C11orf84Q9BUA3 381 aaPredicted RBP14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 PRDM12Q9H4Q4 367 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 KBTBD4Q9NVX7 518 aa14.37□□□□□ -0.11
SNRNP27-203ENST00000450162 KCNH3Q9ULD8 1083 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms