RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 NOMO2Q5JPE7 1267 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 ZNF280BQ86YH2 543 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 BCL7CQ8WUZ0 217 aaPredicted RBP13.75□□□□□ -0.21
MSH5-209ENST00000450148 C1QTNF1Q9BXJ1 281 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 NFKBIZQ9BYH8 718 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 NGRNQ9NPE2 291 aaKnown RBP13.75□□□□□ -0.21
MSH5-209ENST00000450148 DNAJB4Q9UDY4 337 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 PUF60Q9UHX1 559 aaKnown RBP13.75□□□□□ -0.21
MSH5-209ENST00000450148 DBR1Q9UK59 544 aaKnown RBP13.75□□□□□ -0.21
MSH5-209ENST00000450148 FAM50BQ9Y247 325 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 INPPL1O15357 1258 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 USO1O60763 962 aaKnown RBP13.74□□□□□ -0.21
MSH5-209ENST00000450148 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
MSH5-209ENST00000450148 DDHD2O94830 711 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 COL9A1P20849 921 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 AXLP30530 894 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 KRT17Q04695 432 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 ECM1Q16610 540 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 POTEGQ6S5H5 508 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 GLB1LQ6UWU2 654 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 FAM184AQ8NB25 1140 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 PGBD4Q96DM1 585 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 IGSF21Q96ID5 467 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 CPB2Q96IY4 423 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 VN1R3Q9BXE9 311 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 EIF2AQ9BY44 585 aaKnown RBP13.74□□□□□ -0.21
MSH5-209ENST00000450148 POLR3FQ9H1D9 316 aaPredicted RBP13.74□□□□□ -0.21
MSH5-209ENST00000450148 RSAD1Q9HA92 442 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 GPRC5CQ9NQ84 441 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 ENTPD7Q9NQZ7 604 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 RAPGEFL1Q9UHV5 662 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 INPP5FQ9Y2H2 1132 aa13.74□□□□□ -0.21
MSH5-209ENST00000450148 TRIP11Q15643 1979 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 C2orf71A6NGG8 1288 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 GPR37L1O60883 481 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 ERLIN2O94905 339 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 ARF4P18085 180 aaPredicted RBP13.73□□□□□ -0.21
MSH5-209ENST00000450148 SSTR3P32745 418 aaPredicted RBP13.73□□□□□ -0.21
MSH5-209ENST00000450148 SLC11A1P49279 550 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 ALDH7A1P49419 539 aaKnown RBP13.73□□□□□ -0.21
MSH5-209ENST00000450148 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
MSH5-209ENST00000450148 TFDP1Q14186 410 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 SYCE2Q6PIF2 218 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 TMC7Q7Z402 723 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 MRPL43Q8N983 215 aaKnown RBP13.73□□□□□ -0.21
MSH5-209ENST00000450148 SUSD6Q92537 303 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 TMX3Q96JJ7 454 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 ZBP1Q9H171 429 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 CSRNP2Q9H175 543 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 S1PR5Q9H228 398 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 IPPQ9Y573 584 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 PCDHB6Q9Y5E3 794 aa13.73□□□□□ -0.21
MSH5-209ENST00000450148 CNTNAP2Q9UHC6 1331 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 INO80B-WBP1J3KQ70 363 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 B4GALT5O43286 388 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 MUTP22033 750 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 SMC1AQ14683 1233 aaKnown RBP13.72□□□□□ -0.21
MSH5-209ENST00000450148 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
MSH5-209ENST00000450148 ANKRD54Q6NXT1 300 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 NOTUMQ6P988 496 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 DDX53Q86TM3 631 aaKnown RBP13.72□□□□□ -0.21
MSH5-209ENST00000450148 IGSF22Q8N9C0 903 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 BSNDQ8WZ55 320 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 CCDC51Q96ER9 411 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 TMEM169Q96HH4 297 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 NACC1Q96RE7 527 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 MIOSQ9NXC5 875 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
MSH5-209ENST00000450148 HES2Q9Y543 173 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 IRAK3Q9Y616 596 aa13.72□□□□□ -0.21
MSH5-209ENST00000450148 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 CLASP2O75122 1294 aaKnown RBP13.71□□□□□ -0.21
MSH5-209ENST00000450148 EFEMP2O95967 443 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 CTSAP10619 480 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 CYP11B2P19099 503 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 PTGDRQ13258 359 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 IL17AQ16552 155 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 PADI6Q6TGC4 694 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 CDR2LQ86X02 465 aaPredicted RBP13.71□□□□□ -0.21
MSH5-209ENST00000450148 VPS52Q8N1B4 723 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 MCPH1Q8NEM0 835 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 ERMNQ8TAM6 284 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 AUTS2Q8WXX7 1259 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 CCDC43Q96MW1 224 aaKnown RBP13.71□□□□□ -0.21
MSH5-209ENST00000450148 FZD8Q9H461 694 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.71□□□□□ -0.21
MSH5-209ENST00000450148 NOL7Q9UMY1 257 aaKnown RBP13.71□□□□□ -0.21
MSH5-209ENST00000450148 HCFC2Q9Y5Z7 792 aa13.71□□□□□ -0.21
MSH5-209ENST00000450148 C5orf42Q9H799 3197 aa13.71□□□□□ -0.22
MSH5-209ENST00000450148 PLXNA3P51805 1871 aa13.7□□□□□ -0.22
MSH5-209ENST00000450148 CARNS1A5YM72 827 aa13.7□□□□□ -0.22
MSH5-209ENST00000450148 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms