RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 MRPL9Q9BYD2 267 aaKnown RBP9.09□□□□□ -0.95
LINC01961-201ENST00000449954 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 TCP11L1Q9NUJ3 509 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 WASF3Q9UPY6 502 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 ZFP37Q9Y6Q3 630 aaPredicted RBP9.09□□□□□ -0.95
LINC01961-201ENST00000449954 NUMBLQ9Y6R0 609 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 AKAP13Q12802 2813 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 LAMA4Q16363 1823 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 RALGAPA1Q6GYQ0 2036 aa9.09□□□□□ -0.95
LINC01961-201ENST00000449954 LAMA1P25391 3075 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 SMIM35A0A1B0GVV1 85 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 EIF4E1BA6NMX2 242 aaKnown RBP9.08□□□□□ -0.96
LINC01961-201ENST00000449954 SPATA31C2B4DYI2 1134 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 RNF113AO15541 343 aaKnown RBP9.08□□□□□ -0.96
LINC01961-201ENST00000449954 TDGF1P13385 188 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 MARK3P27448 753 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 CNR2P34972 360 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 TCF7P36402 384 aaPredicted RBP9.08□□□□□ -0.96
LINC01961-201ENST00000449954 FAM189BP81408 668 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 TMEM62Q0P6H9 643 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 SNW1Q13573 536 aaKnown RBP9.08□□□□□ -0.96
LINC01961-201ENST00000449954 SIM2Q14190 667 aaPredicted RBP9.08□□□□□ -0.96
LINC01961-201ENST00000449954 PSAPL1Q6NUJ1 521 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 BPHLQ86WA6 291 aaPredicted RBP9.08□□□□□ -0.96
LINC01961-201ENST00000449954 TTC14Q96N46 770 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 BCAS3Q9H6U6 928 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 TNNQ9UQP3 1299 aa9.08□□□□□ -0.96
LINC01961-201ENST00000449954 MRPS17Q9Y2R5 130 aaKnown RBP9.08□□□□□ -0.96
LINC01961-201ENST00000449954 MTF2Q9Y483 593 aaPredicted RBP9.08□□□□□ -0.96
LINC01961-201ENST00000449954 MYH6P13533 1939 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 M0R2C6 588 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 OPLAHO14841 1288 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 CAPN5O15484 640 aaPredicted RBP9.07□□□□□ -0.96
LINC01961-201ENST00000449954 AP1G2O75843 785 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 KLRC2P26717 231 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 METAP2P50579 478 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC01961-201ENST00000449954 BCAR1P56945 870 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 IGBP1P78318 339 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 GPC5P78333 572 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 SP4Q02446 784 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 ZNF252P-AS1Q0IIN9 211 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 WTAPQ15007 396 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 QRICH1Q2TAL8 776 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 SLC44A4Q53GD3 710 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 STPG1Q5TH74 334 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 DDX53Q86TM3 631 aaKnown RBP9.07□□□□□ -0.96
LINC01961-201ENST00000449954 ADGRF4Q8IZF3 695 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 LRRN4Q8WUT4 740 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 AUTS2Q8WXX7 1259 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 SMARCAD1Q9H4L7 1026 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 ANAPC4Q9UJX5 808 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 PCDHA2Q9Y5H9 948 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 GREB1Q4ZG55 1949 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 MYH15Q9Y2K3 1946 aa9.07□□□□□ -0.96
LINC01961-201ENST00000449954 DOCK5Q9H7D0 1870 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 CCDC195A0A1B0GUA6 201 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 RAB11FIP3O75154 756 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 FGRP09769 529 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 GOLGA8HP0CJ92 632 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 INSRRP14616 1297 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 TARSP26639 723 aaKnown RBP9.06□□□□□ -0.96
LINC01961-201ENST00000449954 CCR3P51677 355 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 MTAPQ13126 283 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 NNTQ13423 1086 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 MTSS1LQ765P7 747 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 PDZD3Q86UT5 571 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 PHKBQ93100 1093 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 AMNQ9BXJ7 453 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 UBA5Q9GZZ9 404 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 MAN1C1Q9NR34 630 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 RNF19AQ9NV58 838 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 ST3GAL5Q9UNP4 418 aa9.06□□□□□ -0.96
LINC01961-201ENST00000449954 NOC2LQ9Y3T9 749 aaKnown RBP9.06□□□□□ -0.96
LINC01961-201ENST00000449954 FRMPD4Q14CM0 1322 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 INPPL1O15357 1258 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 DHX16O60231 1041 aaKnown RBP9.05□□□□□ -0.96
LINC01961-201ENST00000449954 PAPLNO95428 1278 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 ZNF806P0C7X5 589 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 HOXA13P31271 388 aaPredicted RBP9.05□□□□□ -0.96
LINC01961-201ENST00000449954 NOVA1P51513 510 aaKnown RBP9.05□□□□□ -0.96
LINC01961-201ENST00000449954 ADCY1Q08828 1119 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 SEMA3FQ13275 785 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 ASPRV1Q53RT3 343 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 ZKSCAN2Q63HK3 967 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 ZNF852Q6ZMS4 543 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 GET4Q7L5D6 327 aaPredicted RBP9.05□□□□□ -0.96
LINC01961-201ENST00000449954 ITPRIPQ8IWB1 547 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 GLIS3Q8NEA6 775 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 SEPT1Q8WYJ6 367 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 SMG7Q92540 1137 aaKnown RBP9.05□□□□□ -0.96
LINC01961-201ENST00000449954 IGSF21Q96ID5 467 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 SCNM1Q9BWG6 230 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 CHRDQ9H2X0 955 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 CPVLQ9H3G5 476 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 TOMM22Q9NS69 142 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 CACNA2D2Q9NY47 1150 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 GINS2Q9Y248 185 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 ADAMTS20P59510 1910 aa9.05□□□□□ -0.96
LINC01961-201ENST00000449954 NT5C1B-RDH14C9J2C7 533 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms