RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 DHX38Q92620 1227 aaKnown RBP16.05■□□□□ 0.16
TNF-208ENST00000449264 DUSP9Q99956 384 aaKnown RBP16.05■□□□□ 0.16
TNF-208ENST00000449264 NFKBIZQ9BYH8 718 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 GCOM2Q9BZD3 368 aaPredicted RBP16.05■□□□□ 0.16
TNF-208ENST00000449264 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 AGPAT3Q9NRZ7 376 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 FANCLQ9NW38 375 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 CDY2AQ9Y6F7 541 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 RBAK-RBAKDNI3L0D1 243 aa16.04■□□□□ 0.16
TNF-208ENST00000449264 FGFR4P22455 802 aa16.04■□□□□ 0.16
TNF-208ENST00000449264 POU5F1BQ06416 359 aa16.04■□□□□ 0.16
TNF-208ENST00000449264 FAM126BQ8IXS8 530 aa16.04■□□□□ 0.16
TNF-208ENST00000449264 PAWRQ96IZ0 340 aaKnown RBP16.04■□□□□ 0.16
TNF-208ENST00000449264 TARS2Q9BW92 718 aaKnown RBP16.04■□□□□ 0.16
TNF-208ENST00000449264 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
TNF-208ENST00000449264 SEZ6LQ9BYH1 1024 aa16.04■□□□□ 0.16
TNF-208ENST00000449264 SAMSN1Q9NSI8 373 aaKnown RBP16.04■□□□□ 0.16
TNF-208ENST00000449264 TRAF3IP3Q9Y228 551 aa16.04■□□□□ 0.16
TNF-208ENST00000449264 TRPV2Q9Y5S1 764 aa16.04■□□□□ 0.16
TNF-208ENST00000449264 MKI67P46013 3256 aaKnown RBP16.04■□□□□ 0.16
TNF-208ENST00000449264 FSD2A1L4K1 749 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 ANKRD63C9JTQ0 380 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 B4GALT5O43286 388 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 ERLIN2O94905 339 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 NR3C1P04150 777 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 IQCF3P0C7M6 154 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 COL6A1P12109 1028 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 NR2F2P24468 414 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 CDK7P50613 346 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 CYP2J2P51589 502 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 SLC39A5Q6ZMH5 540 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 SRGAP1Q7Z6B7 1085 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 IFNLR1Q8IU57 520 aaPredicted RBP16.03■□□□□ 0.16
TNF-208ENST00000449264 CREBRFQ8IUR6 639 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 GOLGA5Q8TBA6 731 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 NOC3LQ8WTT2 800 aaKnown RBP16.03■□□□□ 0.16
TNF-208ENST00000449264 TMEM40Q8WWA1 233 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 KCNN1Q92952 543 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
TNF-208ENST00000449264 CELF4Q9BZC1 486 aaKnown RBP16.03■□□□□ 0.16
TNF-208ENST00000449264 C11orf49Q9H6J7 331 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 GRPEL1Q9HAV7 217 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 PRMT7Q9NVM4 692 aaPredicted RBP16.03■□□□□ 0.16
TNF-208ENST00000449264 ANKFY1Q9P2R3 1169 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 MROH7Q68CQ1 1323 aa16.03■□□□□ 0.16
TNF-208ENST00000449264 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 RPLP2P05387 115 aaKnown RBP16.02■□□□□ 0.16
TNF-208ENST00000449264 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
TNF-208ENST00000449264 MATR3P43243 847 aaKnown RBP eCLIP16.02■□□□□ 0.16
TNF-208ENST00000449264 CRYBB1P53674 252 aaPredicted RBP16.02■□□□□ 0.16
TNF-208ENST00000449264 PLCB2Q00722 1185 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.16
TNF-208ENST00000449264 SNX17Q15036 470 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 EDRF1Q3B7T1 1238 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 TRIM60Q495X7 471 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 ARMCX5Q6P1M9 558 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 SLC39A4Q6P5W5 647 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 LRRC55Q6ZSA7 311 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 CBWD1Q9BRT8 395 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 HSD3B7Q9H2F3 369 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 FZD8Q9H461 694 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 PCIF1Q9H4Z3 704 aa16.02■□□□□ 0.16
TNF-208ENST00000449264 ACKR2O00590 384 aa16.02■□□□□ 0.15
TNF-208ENST00000449264 TLR3O15455 904 aaKnown RBP16.02■□□□□ 0.15
TNF-208ENST00000449264 HARSP12081 509 aaKnown RBP16.02■□□□□ 0.15
TNF-208ENST00000449264 EIF4BP23588 611 aaKnown RBP16.02■□□□□ 0.15
TNF-208ENST00000449264 FKBP3Q00688 224 aaKnown RBP16.02■□□□□ 0.15
TNF-208ENST00000449264 ADAM9Q13443 819 aa16.02■□□□□ 0.15
TNF-208ENST00000449264 TRIM71Q2Q1W2 868 aaKnown RBP16.02■□□□□ 0.15
TNF-208ENST00000449264 CATSPER4Q7RTX7 472 aa16.02■□□□□ 0.15
TNF-208ENST00000449264 RPAINQ86UA6 219 aa16.02■□□□□ 0.15
TNF-208ENST00000449264 ZNF710Q8N1W2 664 aa16.02■□□□□ 0.15
TNF-208ENST00000449264 POMGNT1Q8WZA1 660 aa16.02■□□□□ 0.15
TNF-208ENST00000449264 ATP11BQ9Y2G3 1177 aa16.02■□□□□ 0.15
TNF-208ENST00000449264 CNTNAP2Q9UHC6 1331 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 CETN3O15182 167 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 PIGRP01833 764 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 CHRNA1P02708 482 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 ATP1A3P13637 1013 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 SFPQP23246 707 aaKnown RBP eCLIP16.01■□□□□ 0.15
TNF-208ENST00000449264 RPL13P26373 211 aaKnown RBP16.01■□□□□ 0.15
TNF-208ENST00000449264 MGAT3Q09327 533 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 AMHR2Q16671 573 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 ZNF618Q5T7W0 954 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 CEP135Q66GS9 1140 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 FOXR2Q6PJQ5 311 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 NECAB2Q7Z6G3 386 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 CDR2LQ86X02 465 aaPredicted RBP16.01■□□□□ 0.15
TNF-208ENST00000449264 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
TNF-208ENST00000449264 CPB2Q96IY4 423 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 ZBTB45Q96K62 511 aaPredicted RBP16.01■□□□□ 0.15
TNF-208ENST00000449264 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 THAP9Q9H5L6 903 aa16.01■□□□□ 0.15
TNF-208ENST00000449264 TSPAN1O60635 241 aa16■□□□□ 0.15
TNF-208ENST00000449264 FGFR1OPO95684 399 aaKnown RBP16■□□□□ 0.15
TNF-208ENST00000449264 CD4P01730 458 aa16■□□□□ 0.15
TNF-208ENST00000449264 CKBP12277 381 aa16■□□□□ 0.15
TNF-208ENST00000449264 EN2P19622 333 aaPredicted RBP16■□□□□ 0.15
TNF-208ENST00000449264 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
TNF-208ENST00000449264 ADSSP30520 456 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms