RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CYP4F11Q9HBI6 524 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 ATP8A2Q9NTI2 1148 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 KNL1Q8NG31 2342 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 BTBD18B2RXH4 712 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 FAM47E-STBD1D6RA91 191 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 BRAFP15056 766 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 CDC25BP30305 580 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 RGS2P41220 211 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 TRIM32Q13049 653 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ARHGEF16Q5VV41 709 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 NELFCDQ8IXH7 590 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ZNF483Q8TF39 744 aaPredicted RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 KLHL8Q9P2G9 620 aaPredicted RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 MYO1GB0I1T2 1018 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 CNOT3O75175 753 aaKnown RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 APOC1P02654 83 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SLCO1A2P46721 670 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 FAM47CQ5HY64 1035 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 RHOT2Q8IXI1 618 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ELMO2Q96JJ3 720 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 RBBP8Q99708 897 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 CAAP1Q9H8G2 361 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 DNAJC12Q9UKB3 198 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 PSMD14O00487 310 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ADAM9Q13443 819 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 TCIRG1Q13488 830 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 BBS9Q3SYG4 887 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ELMOD1Q8N336 334 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ADI1Q9BV57 179 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 RGS18Q9NS28 235 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 PI4KAP2A4QPH2 592 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 A8MXQ7 604 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 DDX39AO00148 427 aaKnown RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SCRN3Q0VDG4 424 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 STX5Q13190 355 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 POLNQ7Z5Q5 900 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 CROCCP3Q8IVE0 287 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 AGGF1Q8N302 714 aaeCLIP9.44□□□□□ -0.91e-6■□□□□ 8.6
NIPBL-202ENST00000448238 PI4KAP1Q8N8J0 262 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SYMPKQ92797 1274 aaKnown RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 CLCC1Q96S66 551 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 PDS5BQ9NTI5 1447 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SCGNO76038 276 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 RPS6KB1P23443 525 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 PRAMEP78395 509 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 HDLBPQ00341 1268 aaKnown RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SLITRK2Q9H156 845 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ZBTB3Q9H5J0 574 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 MOSPD1Q9UJG1 213 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SOGA1O94964 1423 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 KLHL2O95198 593 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ACADSP16219 412 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ZRANB3Q5FWF4 1079 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SPDYAQ5MJ70 313 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ODR4Q5SWX8 454 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 EFL1Q7Z2Z2 1120 aaKnown RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SFR1Q86XK3 245 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SLC10A4Q96EP9 437 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 F6X3S4 739 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 LAD1O00515 517 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SMNDC1O75940 238 aaKnown RBP eCLIP9.44□□□□□ -0.98e-9■■■□□ 17
NIPBL-202ENST00000448238 ARL3P36405 182 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 CRYMQ14894 314 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 RRS1Q15050 365 aaKnown RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 FAM9CQ8IZT9 166 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 TTC29Q8NA56 475 aaPredicted RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 RUBCNQ92622 972 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 ARL8AQ96BM9 186 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 S100A13Q99584 98 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 SLC12A5Q9H2X9 1139 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 C20orf96Q9NUD7 363 aaPredicted RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 CCDC87Q9NVE4 849 aa9.44□□□□□ -0.9
NIPBL-202ENST00000448238 CCDC59Q9P031 241 aaKnown RBP9.44□□□□□ -0.9
NIPBL-202ENST00000448238 IFNA14P01570 189 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 ZSCAN20P17040 1043 aaPredicted RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 GAP43P17677 238 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 ARF3P61204 181 aaPredicted RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 ARF1P84077 181 aaKnown RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 BNC1Q01954 994 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 POU5F1BQ06416 359 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 EDRF1Q3B7T1 1238 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 IZUMO1Q8IYV9 350 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 CCNYL1Q8N7R7 359 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 SH3TC2Q8TF17 1288 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 MAGED4Q96JG8 741 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 TSEN34Q9BSV6 310 aaKnown RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 PHACTR1Q9C0D0 580 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 DYRK4Q9NR20 520 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 NRBP2Q9NSY0 501 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 PRKAG2Q9UGJ0 569 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 TMA7Q9Y2S6 64 aaKnown RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 PSTPIP1O43586 416 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 USP1O94782 785 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 PSMC2P35998 433 aaKnown RBP9.43□□□□□ -0.9
NIPBL-202ENST00000448238 CLEC16AQ2KHT3 1053 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 TCEANC2Q96MN5 208 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 GINM1Q9NU53 330 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 TMCC3Q9ULS5 477 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 ADCY1Q08828 1119 aa9.43□□□□□ -0.9
NIPBL-202ENST00000448238 ITPRIPL1Q6GPH6 555 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms