RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 CDR2LQ86X02 465 aaPredicted RBP27.61■■■□□ 2.01
UFD1-204ENST00000447868 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.61■■■□□ 2.01
UFD1-204ENST00000447868 KLHL23Q8NBE8 558 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 EPSTI1Q96J88 318 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 ZNF396Q96N95 335 aaPredicted RBP27.61■■■□□ 2.01
UFD1-204ENST00000447868 AAASQ9NRG9 546 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 PRMT7Q9NVM4 692 aaPredicted RBP27.61■■■□□ 2.01
UFD1-204ENST00000447868 TFIP11Q9UBB9 837 aaKnown RBP27.61■■■□□ 2.01
UFD1-204ENST00000447868 INPP5FQ9Y2H2 1132 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 PCDHB12Q9Y5F1 795 aa27.61■■■□□ 2.01
UFD1-204ENST00000447868 F13A1P00488 732 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 PLCG1P19174 1290 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 PEX3P56589 373 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 DHX8Q14562 1220 aaKnown RBP27.6■■■□□ 2.01
UFD1-204ENST00000447868 STK38Q15208 465 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 TMEM132AQ24JP5 1023 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 USP49Q70CQ1 688 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 DAW1Q8N136 415 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 COLGALT1Q8NBJ5 622 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 LRRC15Q8TF66 581 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 P2RX5Q93086 422 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 CCDC51Q96ER9 411 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 DRC1Q96MC2 740 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 FZD8Q9H461 694 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 PLAGL2Q9UPG8 496 aa27.6■■■□□ 2.01
UFD1-204ENST00000447868 CCDC169A6NNP5 214 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 SFI1A8K8P3 1242 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 ITGB1P05556 798 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 PRKCBP05771 671 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 LAG3P18627 525 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 NASPP49321 788 aaPredicted RBP27.59■■■□□ 2.01
UFD1-204ENST00000447868 MAPK6Q16659 721 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 NAALADL2Q58DX5 795 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 GLB1LQ6UWU2 654 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 PPP4R3CPQ6ZMV5 832 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 MRPL10Q7Z7H8 261 aaKnown RBP27.59■■■□□ 2.01
UFD1-204ENST00000447868 SMG8Q8ND04 991 aaKnown RBP27.59■■■□□ 2.01
UFD1-204ENST00000447868 SYMPKQ92797 1274 aaKnown RBP27.59■■■□□ 2.01
UFD1-204ENST00000447868 PRIMPOLQ96LW4 560 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 MRPL9Q9BYD2 267 aaKnown RBP27.59■■■□□ 2.01
UFD1-204ENST00000447868 USP20Q9Y2K6 914 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 IPPQ9Y573 584 aa27.59■■■□□ 2.01
UFD1-204ENST00000447868 NPHP3-ACAD11A0A0J9YXS1 232 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 NCLP19338 710 aaKnown RBP27.58■■■□□ 2.01
UFD1-204ENST00000447868 GUCY2CP25092 1073 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 MAPK7Q13164 816 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 PRPF4BQ13523 1007 aaKnown RBP27.58■■■□□ 2.01
UFD1-204ENST00000447868 FAM187BQ17R55 369 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 AGMOQ6ZNB7 445 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 THNSL1Q8IYQ7 743 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 KRI1Q8N9T8 703 aaKnown RBP27.58■■■□□ 2.01
UFD1-204ENST00000447868 TIPINQ9BVW5 301 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 TRIM6Q9C030 488 aaPredicted RBP27.58■■■□□ 2.01
UFD1-204ENST00000447868 CCSER1Q9C0I3 900 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 CCDC113Q9H0I3 377 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 BLOC1S4Q9NUP1 217 aa27.58■■■□□ 2.01
UFD1-204ENST00000447868 A0A1B0GUA9 196 aa27.57■■■□□ 2
UFD1-204ENST00000447868 TTLL13PA6NNM8 815 aa27.57■■■□□ 2
UFD1-204ENST00000447868 OFD1O75665 1012 aa27.57■■■□□ 2
UFD1-204ENST00000447868 NPTXRO95502 500 aa27.57■■■□□ 2
UFD1-204ENST00000447868 ITGA4P13612 1032 aa27.57■■■□□ 2
UFD1-204ENST00000447868 PBX3P40426 434 aa27.57■■■□□ 2
UFD1-204ENST00000447868 NPTX2P47972 431 aa27.57■■■□□ 2
UFD1-204ENST00000447868 CACNB1Q02641 598 aaPredicted RBP27.57■■■□□ 2
UFD1-204ENST00000447868 DMP1Q13316 513 aaPredicted RBP27.57■■■□□ 2
UFD1-204ENST00000447868 MCM6Q14566 821 aa27.57■■■□□ 2
UFD1-204ENST00000447868 NOMO2Q5JPE7 1267 aa27.57■■■□□ 2
UFD1-204ENST00000447868 SLC27A1Q6PCB7 646 aa27.57■■■□□ 2
UFD1-204ENST00000447868 CNNM3Q8NE01 707 aa27.57■■■□□ 2
UFD1-204ENST00000447868 RAD54LQ92698 747 aa27.57■■■□□ 2
UFD1-204ENST00000447868 APOL6Q9BWW8 343 aa27.57■■■□□ 2
UFD1-204ENST00000447868 LMAN2LQ9H0V9 348 aa27.57■■■□□ 2
UFD1-204ENST00000447868 RSAD1Q9HA92 442 aa27.57■■■□□ 2
UFD1-204ENST00000447868 DAXXQ9UER7 740 aaPredicted RBP27.57■■■□□ 2
UFD1-204ENST00000447868 HES2Q9Y543 173 aa27.57■■■□□ 2
UFD1-204ENST00000447868 CNTNAP2Q9UHC6 1331 aa27.57■■■□□ 2
UFD1-204ENST00000447868 REV3LO60673 3130 aa27.57■■■□□ 2
UFD1-204ENST00000447868 PLXNA4Q9HCM2 1894 aa27.57■■■□□ 2
UFD1-204ENST00000447868 EDN1P05305 212 aa27.56■■■□□ 2
UFD1-204ENST00000447868 DNAJB1P25685 340 aa27.56■■■□□ 2
UFD1-204ENST00000447868 EFNA5P52803 228 aa27.56■■■□□ 2
UFD1-204ENST00000447868 TIGD5Q53EQ6 642 aa27.56■■■□□ 2
UFD1-204ENST00000447868 GPBP1Q86WP2 473 aa27.56■■■□□ 2
UFD1-204ENST00000447868 LINC00301Q8NCQ3 95 aa27.56■■■□□ 2
UFD1-204ENST00000447868 SPPL3Q8TCT6 385 aa27.56■■■□□ 2
UFD1-204ENST00000447868 ZNF558Q96NG5 402 aa27.56■■■□□ 2
UFD1-204ENST00000447868 RNF39Q9H2S5 420 aa27.56■■■□□ 2
UFD1-204ENST00000447868 KMT5AQ9NQR1 393 aa27.56■■■□□ 2
UFD1-204ENST00000447868 KCND2Q9NZV8 630 aa27.56■■■□□ 2
UFD1-204ENST00000447868 MORC2Q9Y6X9 1032 aaPredicted RBP27.56■■■□□ 2
UFD1-204ENST00000447868 ATG2AQ2TAZ0 1938 aa27.56■■■□□ 2
UFD1-204ENST00000447868 MYH11P35749 1972 aa27.56■■■□□ 2
UFD1-204ENST00000447868 ACKR2O00590 384 aa27.55■■■□□ 2
UFD1-204ENST00000447868 FGF18O76093 207 aa27.55■■■□□ 2
UFD1-204ENST00000447868 TXLNAP40222 546 aa27.55■■■□□ 2
UFD1-204ENST00000447868 ARSHQ5FYA8 562 aa27.55■■■□□ 2
UFD1-204ENST00000447868 KCNT2Q6UVM3 1135 aa27.55■■■□□ 2
UFD1-204ENST00000447868 URGCPQ8TCY9 931 aa27.55■■■□□ 2
UFD1-204ENST00000447868 NXF3Q9H4D5 531 aaKnown RBP27.55■■■□□ 2
UFD1-204ENST00000447868 TBC1D13Q9NVG8 400 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms