RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 C9IYK1 514 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 CHMP2AO43633 222 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 NARSO43776 548 aaKnown RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 MARCH6O60337 910 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 NEMFO60524 1076 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 RPS6KA5O75582 802 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 BAG4O95429 457 aaKnown RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 CXCL14O95715 111 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 TRAPPC10P48553 1259 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 ORC2Q13416 577 aaPredicted RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 GNL2Q13823 731 aaKnown RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 COL9A2Q14055 689 aaPredicted RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 LARP1BQ659C4 914 aaKnown RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 TMC5Q6UXY8 1006 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 LRRC55Q6ZSA7 311 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 MIER3Q7Z3K6 550 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 C1orf210Q8IVY1 113 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 NME8Q8N427 588 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 GPR161Q8N6U8 529 aaKnown RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 TMEM117Q9H0C3 514 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 TMEM161AQ9NX61 479 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 NCDNQ9UBB6 729 aa13.93□□□□□ -0.18
SSR4-205ENST00000447375 RALYQ9UKM9 306 aaKnown RBP13.93□□□□□ -0.18
SSR4-205ENST00000447375 PRR5-ARHGAP8B1AHC4 643 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 ZBTB42B2RXF5 422 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 H3BQV1 296 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 EML1O00423 815 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 ZNF862O60290 1169 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
SSR4-205ENST00000447375 DCNP07585 359 aaKnown RBP13.92□□□□□ -0.18
SSR4-205ENST00000447375 ADRB1P08588 477 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 EPCAMP16422 314 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 ATP2B1P20020 1258 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 MCM7P33993 719 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 TOB1P50616 345 aaPredicted RBP13.92□□□□□ -0.18
SSR4-205ENST00000447375 FAM189BP81408 668 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 ARHGAP8P85298 464 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 SPIRE1Q08AE8 756 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 CALCRLQ16602 461 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 ZNF484Q5JVG2 852 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 ODR4Q5SWX8 454 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 CCDC149Q6ZUS6 474 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 CKAP2LQ8IYA6 745 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
SSR4-205ENST00000447375 CASD1Q96PB1 797 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 RTKNQ9BST9 563 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 ELAC1Q9H777 363 aaKnown RBP13.92□□□□□ -0.18
SSR4-205ENST00000447375 TBC1D17Q9HA65 648 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 IGSF9Q9P2J2 1179 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 CDV3Q9UKY7 258 aaKnown RBP13.92□□□□□ -0.18
SSR4-205ENST00000447375 PCDHA12Q9UN75 941 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 ST3GAL5Q9UNP4 418 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 GINS2Q9Y248 185 aa13.92□□□□□ -0.18
SSR4-205ENST00000447375 NOC2LQ9Y3T9 749 aaKnown RBP13.92□□□□□ -0.18
SSR4-205ENST00000447375 ACACBO00763 2458 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 SMIM35A0A1B0GVV1 85 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 KLRC1P26715 233 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 UGCGQ16739 394 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 TTC38Q5R3I4 469 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 MCTP1Q6DN14 999 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 CABP7Q86V35 215 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 FEZF2Q8TBJ5 459 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 TRAPPC12Q8WVT3 735 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 FAM167AQ96KS9 214 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 TMEM60Q9H2L4 133 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
SSR4-205ENST00000447375 NRBP2Q9NSY0 501 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 CA14Q9ULX7 337 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 NOL7Q9UMY1 257 aaKnown RBP13.91□□□□□ -0.18
SSR4-205ENST00000447375 SIT1Q9Y3P8 196 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 COL1A2P08123 1366 aa13.91□□□□□ -0.18
SSR4-205ENST00000447375 GPR182O15218 404 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 HOXA2O43364 376 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 STBD1O95210 358 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 PDCP20941 246 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 TXKP42681 527 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 EPHA7Q15375 998 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 ZNF174Q15697 407 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 GPR149Q86SP6 731 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 SLC39A11Q8N1S5 342 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 C4orf32Q8N8J7 132 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 NIFKQ9BYG3 293 aaKnown RBP13.9□□□□□ -0.18
SSR4-205ENST00000447375 CDHR5Q9HBB8 845 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 DLGAP2Q9P1A6 1054 aa13.9□□□□□ -0.18
SSR4-205ENST00000447375 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
SSR4-205ENST00000447375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.89□□□□□ -0.19
SSR4-205ENST00000447375 OATP04181 439 aa13.89□□□□□ -0.19
SSR4-205ENST00000447375 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
SSR4-205ENST00000447375 QARSP47897 775 aaKnown RBP13.89□□□□□ -0.19
SSR4-205ENST00000447375 PSMC5P62195 406 aa13.89□□□□□ -0.19
SSR4-205ENST00000447375 PRKCEQ02156 737 aa13.89□□□□□ -0.19
SSR4-205ENST00000447375 LMNB2Q03252 620 aa13.89□□□□□ -0.19
SSR4-205ENST00000447375 XKR3Q5GH77 459 aa13.89□□□□□ -0.19
SSR4-205ENST00000447375 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms