RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 ZNF280BQ86YH2 543 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 CCDC83Q8IWF9 413 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 ASAP3Q8TDY4 903 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 IGSF21Q96ID5 467 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 TMEM60Q9H2L4 133 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 RSAD1Q9HA92 442 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 ARIH1Q9Y4X5 557 aaPredicted RBP20.28■□□□□ 0.84
COL9A1-205ENST00000447041 A0A087WWV3 80 aa20.27■□□□□ 0.84
COL9A1-205ENST00000447041 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.27■□□□□ 0.84
COL9A1-205ENST00000447041 TSPAN1O60635 241 aa20.27■□□□□ 0.84
COL9A1-205ENST00000447041 EIF5BO60841 1220 aaKnown RBP20.27■□□□□ 0.84
COL9A1-205ENST00000447041 CLASP2O75122 1294 aaKnown RBP20.27■□□□□ 0.84
COL9A1-205ENST00000447041 ERLIN2O94905 339 aa20.27■□□□□ 0.84
COL9A1-205ENST00000447041 ATP2B1P20020 1258 aa20.27■□□□□ 0.84
COL9A1-205ENST00000447041 SLC11A1P49279 550 aa20.27■□□□□ 0.84
COL9A1-205ENST00000447041 RARRES1P49788 294 aa20.27■□□□□ 0.84
COL9A1-205ENST00000447041 MRPL10Q7Z7H8 261 aaKnown RBP20.27■□□□□ 0.84
COL9A1-205ENST00000447041 CASP10Q92851 521 aa20.27■□□□□ 0.84
COL9A1-205ENST00000447041 DDHD2O94830 711 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 CXCL14O95715 111 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 MCM7P33993 719 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 PTENP60484 403 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 CAPSQ13938 189 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 MXD4Q14582 209 aaPredicted RBP20.26■□□□□ 0.83
COL9A1-205ENST00000447041 HFE2Q6ZVN8 426 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 DDX53Q86TM3 631 aaKnown RBP20.26■□□□□ 0.83
COL9A1-205ENST00000447041 SMG8Q8ND04 991 aaKnown RBP20.26■□□□□ 0.83
COL9A1-205ENST00000447041 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 PIGOQ8TEQ8 1089 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 CPB2Q96IY4 423 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 CCDC43Q96MW1 224 aaKnown RBP20.26■□□□□ 0.83
COL9A1-205ENST00000447041 VN1R3Q9BXE9 311 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 EIF2AQ9BY44 585 aaKnown RBP20.26■□□□□ 0.83
COL9A1-205ENST00000447041 ANKEF1Q9NU02 776 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 LIMCH1Q9UPQ0 1083 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 CNTNAP2Q9UHC6 1331 aa20.26■□□□□ 0.83
COL9A1-205ENST00000447041 INO80B-WBP1J3KQ70 363 aa20.25■□□□□ 0.83
COL9A1-205ENST00000447041 DGAT1O75907 488 aa20.25■□□□□ 0.83
COL9A1-205ENST00000447041 POMCP01189 267 aa20.25■□□□□ 0.83
COL9A1-205ENST00000447041 CTSAP10619 480 aa20.25■□□□□ 0.83
COL9A1-205ENST00000447041 NCLP19338 710 aaKnown RBP20.25■□□□□ 0.83
COL9A1-205ENST00000447041 SP100P23497 879 aaPredicted RBP20.25■□□□□ 0.83
COL9A1-205ENST00000447041 MBTD1Q05BQ5 628 aa20.25■□□□□ 0.83
COL9A1-205ENST00000447041 EDAQ92838 391 aa20.25■□□□□ 0.83
COL9A1-205ENST00000447041 IPPQ9Y573 584 aa20.25■□□□□ 0.83
COL9A1-205ENST00000447041 TRIOO75962 3097 aa20.25■□□□□ 0.83
COL9A1-205ENST00000447041 USO1O60763 962 aaKnown RBP20.24■□□□□ 0.83
COL9A1-205ENST00000447041 HOXB8P17481 243 aaPredicted RBP20.24■□□□□ 0.83
COL9A1-205ENST00000447041 GLRA2P23416 452 aa20.24■□□□□ 0.83
COL9A1-205ENST00000447041 ARL2P36404 184 aa20.24■□□□□ 0.83
COL9A1-205ENST00000447041 TFDP1Q14186 410 aa20.24■□□□□ 0.83
COL9A1-205ENST00000447041 BMS1Q14692 1282 aaKnown RBP20.24■□□□□ 0.83
COL9A1-205ENST00000447041 AMHR2Q16671 573 aa20.24■□□□□ 0.83
COL9A1-205ENST00000447041 IFNLR1Q8IU57 520 aaPredicted RBP20.24■□□□□ 0.83
COL9A1-205ENST00000447041 C8orf76Q96K31 380 aa20.24■□□□□ 0.83
COL9A1-205ENST00000447041 POLR3FQ9H1D9 316 aaPredicted RBP20.24■□□□□ 0.83
COL9A1-205ENST00000447041 HES2Q9Y543 173 aa20.24■□□□□ 0.83
COL9A1-205ENST00000447041 CARNS1A5YM72 827 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 MED24O75448 989 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 SPATA31C1P0DKV0 1188 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 ITGA4P13612 1032 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 AXLP30530 894 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 SAFBQ15424 915 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL9A1-205ENST00000447041 NOTUMQ6P988 496 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 FAM193BQ96PV7 902 aaPredicted RBP20.23■□□□□ 0.83
COL9A1-205ENST00000447041 RNF39Q9H2S5 420 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 GPRC5CQ9NQ84 441 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 IRAK3Q9Y616 596 aa20.23■□□□□ 0.83
COL9A1-205ENST00000447041 TECTAO75443 2155 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 B4GALT5O43286 388 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 WEE2P0C1S8 567 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 EPCAMP16422 314 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 ARF4P18085 180 aaPredicted RBP20.22■□□□□ 0.83
COL9A1-205ENST00000447041 MLH1P40692 756 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 ZXDAP98168 799 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 POU5F1BQ06416 359 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 PCBP1Q15365 356 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL9A1-205ENST00000447041 PTPN14Q15678 1187 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 TPRNQ4KMQ1 711 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 MAEAQ7L5Y9 396 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 CATSPER3Q86XQ3 398 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 C12orf76Q8N812 135 aaPredicted RBP20.22■□□□□ 0.83
COL9A1-205ENST00000447041 CNNM3Q8NE01 707 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 CCDC51Q96ER9 411 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 TMEM175Q9BSA9 504 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 CSRNP2Q9H175 543 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 POMKQ9H5K3 350 aa20.22■□□□□ 0.83
COL9A1-205ENST00000447041 TDRD15B5MCY1 1934 aaKnown RBP20.21■□□□□ 0.83
COL9A1-205ENST00000447041 NRP1O14786 923 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 SSBP05455 408 aaKnown RBP eCLIP20.21■□□□□ 0.83
COL9A1-205ENST00000447041 GIT2Q14161 759 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 ZNF174Q15697 407 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 RARS2Q5T160 578 aaKnown RBP20.21■□□□□ 0.83
COL9A1-205ENST00000447041 KANK3Q6NY19 840 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 CDR2LQ86X02 465 aaPredicted RBP20.21■□□□□ 0.83
COL9A1-205ENST00000447041 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 FEZF2Q8TBJ5 459 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 ZFP42Q96MM3 310 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 GAD1Q99259 594 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 KIF2CQ99661 725 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms