RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 LRFN2Q9ULH4 789 aa24.24■■□□□ 1.47
APOE-204ENST00000446996 NPHP3-ACAD11A0A0J9YXS1 232 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 A0A1B0GUA9 196 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 SFI1A8K8P3 1242 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 K7ERI5 159 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 TBCAO75347 108 aaKnown RBP24.23■■□□□ 1.47
APOE-204ENST00000446996 DGKIO75912 1065 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 UPP2O95045 317 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 RABGGTBP53611 331 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 ECHDC2Q86YB7 292 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 CNNM3Q8NE01 707 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 ZNF689Q96CS4 500 aaPredicted RBP24.23■■□□□ 1.47
APOE-204ENST00000446996 DNAJC19Q96DA6 116 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 RC3H2Q9HBD1 1191 aaKnown RBP24.23■■□□□ 1.47
APOE-204ENST00000446996 GDPD2Q9HCC8 539 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 SEL1LQ9UBV2 794 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 ADGRA3Q8IWK6 1321 aa24.23■■□□□ 1.47
APOE-204ENST00000446996 CNTNAP2Q9UHC6 1331 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 RBAK-RBAKDNI3L0D1 243 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 HOXA2O43364 376 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 PRKCBP05771 671 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 MAPTP10636 758 aaKnown RBP24.22■■□□□ 1.47
APOE-204ENST00000446996 PFKFB1P16118 471 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 ARF4P18085 180 aaPredicted RBP24.22■■□□□ 1.47
APOE-204ENST00000446996 PBX2P40425 430 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 NCKAP1LP55160 1127 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 ZNF598Q86UK7 904 aaKnown RBP24.22■■□□□ 1.47
APOE-204ENST00000446996 MYCT1Q8N699 235 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 FAM105AQ9NUU6 356 aa24.22■■□□□ 1.47
APOE-204ENST00000446996 YBX2Q9Y2T7 364 aaKnown RBP24.22■■□□□ 1.47
APOE-204ENST00000446996 LAMA2P24043 3122 aaKnown RBP24.21■■□□□ 1.47
APOE-204ENST00000446996 A0A1B0GVL5 298 aa24.21■■□□□ 1.47
APOE-204ENST00000446996 FRMD3A2A2Y4 597 aa24.21■■□□□ 1.47
APOE-204ENST00000446996 SLFN14P0C7P3 912 aa24.21■■□□□ 1.47
APOE-204ENST00000446996 GAP43P17677 238 aa24.21■■□□□ 1.47
APOE-204ENST00000446996 CACNB1Q02641 598 aaPredicted RBP24.21■■□□□ 1.47
APOE-204ENST00000446996 TMCO2Q7Z6W1 182 aaPredicted RBP24.21■■□□□ 1.47
APOE-204ENST00000446996 MRPL10Q7Z7H8 261 aaKnown RBP24.21■■□□□ 1.47
APOE-204ENST00000446996 TMEM161BQ8NDZ6 487 aa24.21■■□□□ 1.47
APOE-204ENST00000446996 MRPS27Q92552 414 aaKnown RBP24.21■■□□□ 1.47
APOE-204ENST00000446996 YME1L1Q96TA2 773 aa24.21■■□□□ 1.47
APOE-204ENST00000446996 ST6GALNAC4Q9H4F1 302 aa24.21■■□□□ 1.47
APOE-204ENST00000446996 SLC28A3Q9HAS3 691 aa24.21■■□□□ 1.47
APOE-204ENST00000446996 TRAK2O60296 914 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 PRPF4BQ13523 1007 aaKnown RBP24.2■■□□□ 1.46
APOE-204ENST00000446996 UBXN11Q5T124 520 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 FAM117BQ6P1L5 589 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 DYMQ7RTS9 669 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 CEP57L1Q8IYX8 460 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 PGBD4Q96DM1 585 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 C7orf25Q9BPX7 421 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 KIFC3Q9BVG8 833 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 NKX2-4Q9H2Z4 354 aa24.2■■□□□ 1.46
APOE-204ENST00000446996 FNDC1Q4ZHG4 1894 aaPredicted RBP24.19■■□□□ 1.46
APOE-204ENST00000446996 GOLGA6L4A6NEF3 574 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 N4BP3O15049 544 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 SLC16A4O15374 487 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 SYKP43405 635 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 ZNF697Q5TEC3 545 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 SLC27A1Q6PCB7 646 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 CMTR2Q8IYT2 770 aaKnown RBP24.19■■□□□ 1.46
APOE-204ENST00000446996 FSIP1Q8NA03 581 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 FIZ1Q96SL8 496 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 TRIM9Q9C026 710 aa24.19■■□□□ 1.46
APOE-204ENST00000446996 B4GALT5O43286 388 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 MYL1P05976 194 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 CA3P07451 260 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 MYOGP15173 224 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 ATF7P17544 494 aaPredicted RBP24.18■■□□□ 1.46
APOE-204ENST00000446996 TAS1R3Q7RTX0 852 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 HAUS6Q7Z4H7 955 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 FAM178BQ8IXR5 827 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 CCDC65Q8IXS2 484 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 CPB2Q96IY4 423 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 MRPL4Q9BYD3 311 aaKnown RBP24.18■■□□□ 1.46
APOE-204ENST00000446996 ZNF576Q9H609 170 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 OLFML3Q9NRN5 406 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 PCDHB2Q9Y5E7 798 aa24.18■■□□□ 1.46
APOE-204ENST00000446996 ACTN4O43707 911 aaKnown RBP24.17■■□□□ 1.46
APOE-204ENST00000446996 NDUFA8P51970 172 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 GTF2BQ00403 316 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 STRN3Q13033 797 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 APBB1IPQ7Z5R6 666 aaPredicted RBP24.17■■□□□ 1.46
APOE-204ENST00000446996 TMEM87AQ8NBN3 555 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 SAMD11Q96NU1 681 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 ADPGKQ9BRR6 497 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 TMEM117Q9H0C3 514 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 SEMA6BQ9H3T3 888 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 ZHX3Q9H4I2 956 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 UBN1Q9NPG3 1134 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 SERTAD1Q9UHV2 236 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 TNFSF13BQ9Y275 285 aa24.17■■□□□ 1.46
APOE-204ENST00000446996 LINC01553A4QN01 128 aa24.16■■□□□ 1.46
APOE-204ENST00000446996 TAP1Q03518 808 aa24.16■■□□□ 1.46
APOE-204ENST00000446996 NT5DC1Q5TFE4 455 aa24.16■■□□□ 1.46
APOE-204ENST00000446996 PPP2R2DQ66LE6 453 aa24.16■■□□□ 1.46
APOE-204ENST00000446996 CLEC17AQ6ZS10 378 aa24.16■■□□□ 1.46
APOE-204ENST00000446996 ZNF720Q7Z2F6 126 aa24.16■■□□□ 1.46
APOE-204ENST00000446996 HACE1Q8IYU2 909 aa24.16■■□□□ 1.46
APOE-204ENST00000446996 FIBCD1Q8N539 461 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms