RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PRPF4BQ13523 1007 aaKnown RBP18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 C8orf74Q6P047 294 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 IFT81Q8WYA0 676 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 GPRASP2Q96D09 838 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 FAM213AQ9BRX8 229 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 TMEM117Q9H0C3 514 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 POLR3FQ9H1D9 316 aaPredicted RBP18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 VPS18Q9P253 973 aa18.23■□□□□ 0.51
LAPTM4B-201ENST00000445593 UBE4BO95155 1302 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 LTBP3Q9NS15 1303 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 PSAPP07602 524 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 LLGL1Q15334 1064 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 RPS6KA1Q15418 735 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 TERF2Q15554 542 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 C1orf220Q5T0J3 134 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 DCPSQ96C86 337 aaKnown RBP18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 XPNPEP1Q9NQW7 623 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 LRRIQ4A6NIV6 560 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 POLGP54098 1239 aaPredicted RBP18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 GTF2BQ00403 316 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 GNPTABQ3T906 1256 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 CCDC70Q6NSX1 233 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 OTUD6AQ7L8S5 288 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 ARHGEF26Q96DR7 871 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 BZW2Q9Y6E2 419 aaKnown RBP18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 GHRHRQ02643 423 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 PPP2R5AQ15172 486 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 CFAP221Q4G0U5 840 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 PHLDB2Q86SQ0 1253 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 SEMA4DQ92854 862 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 THAP2Q9H0W7 228 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 GINM1Q9NU53 330 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 ANKFY1Q9P2R3 1169 aa18.22■□□□□ 0.51
LAPTM4B-201ENST00000445593 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 GTPBP10A4D1E9 387 aaKnown RBP18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 CAPN2P17655 700 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 CETN1Q12798 172 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 MKRN3Q13064 507 aaKnown RBP18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 TRADDQ15628 312 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 EPC2Q52LR7 807 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 PEX26Q7Z412 305 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 CYP26B1Q9NR63 512 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 MAP3K20Q9NYL2 800 aaKnown RBP18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 BRCA1P38398 1863 aaKnown RBP18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 SSTR3P32745 418 aaPredicted RBP18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 ACOT2P49753 483 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 MEI1Q5TIA1 1274 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 SLC39A4Q6P5W5 647 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 SND1Q7KZF4 910 aaKnown RBP eCLIP18.21■□□□□ 0.514e-7■■■■□ 21.6
LAPTM4B-201ENST00000445593 TRIM50Q86XT4 487 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 PCDHGC5Q9Y5F6 944 aa18.21■□□□□ 0.51
LAPTM4B-201ENST00000445593 CYP26A1O43174 497 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 LYPLA2O95372 231 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 PRKCIP41743 596 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 STXBP2Q15833 593 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 TAS1R2Q8TE23 839 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 CHRM1P11229 460 aaPredicted RBP18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 PPARDQ03181 441 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 GPATCH11Q8N954 259 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 LMO3Q8TAP4 145 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 ZBTB10Q96DT7 871 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 ZBTB45Q96K62 511 aaPredicted RBP18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 ZNF408Q9H9D4 720 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 ANKEF1Q9NU02 776 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 MAP2K7O14733 419 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 SGPL1O95470 568 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 FDX1P10109 184 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 NCKAP1LP55160 1127 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 TPCN2Q8NHX9 752 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 SLC35G2Q8TBE7 412 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 CTNNBL1Q8WYA6 563 aaPredicted RBP18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 SELENOOQ9BVL4 669 aa18.2■□□□□ 0.5
LAPTM4B-201ENST00000445593 DOCK1Q14185 1865 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 GUCY2DQ02846 1103 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 LY6KQ17RY6 165 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 EAPPQ56P03 285 aaPredicted RBP18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 WDR93Q6P2C0 686 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 HNRNPLLQ8WVV9 542 aaKnown RBP18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 RPGRIP1Q96KN7 1286 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 FAN1Q9Y2M0 1017 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 PHIPQ8WWQ0 1821 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 COPB2P35606 906 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 ZNF211Q13398 564 aaPredicted RBP18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 SLC47A2Q86VL8 602 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 SLC9A9Q8IVB4 645 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 ATP6V0A4Q9HBG4 840 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 ZNF302Q9NR11 478 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 ADAMTS5Q9UNA0 930 aa18.19■□□□□ 0.5
LAPTM4B-201ENST00000445593 BUB1BO60566 1050 aaPredicted RBP18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 KIF4AO95239 1232 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 KRT5P13647 590 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 MIS18BP1Q6P0N0 1132 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 IFT74Q96LB3 600 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 GLI1P08151 1106 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 ATP4AP20648 1035 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 LIG4P49917 911 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms