RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 TMC2Q8TDI7 906 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 ATP8B4Q8TF62 1192 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 BSNDQ8WZ55 320 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 ALS2CR12Q96Q35 445 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 NAPGQ99747 312 aaPredicted RBP11.37□□□□□ -0.59
CALD1-211ENST00000445569 INTS2Q9H0H0 1204 aaKnown RBP11.37□□□□□ -0.59
CALD1-211ENST00000445569 C2orf40Q9H1Z8 148 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 BCAS3Q9H6U6 928 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 EFCC1Q9HA90 598 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 NLRC4Q9NPP4 1024 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 ARHGAP20Q9P2F6 1191 aa11.37□□□□□ -0.59
CALD1-211ENST00000445569 ANO9A1A5B4 782 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 MANSC4A6NHS7 340 aaPredicted RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 LRRIQ4A6NIV6 560 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 MAFO75444 373 aaPredicted RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 URI1O94763 535 aaPredicted RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 ARIH2O95376 493 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 GH1P01241 217 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 CNGA1P29973 690 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 ARL2P36404 184 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 PRKCIP41743 596 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 STAT1P42224 750 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 ARHGAP25P42331 645 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 MXI1P50539 228 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 MCCD1P59942 119 aaPredicted RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 TFDP1Q14186 410 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 GRB14Q14449 540 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 MXD4Q14582 209 aaPredicted RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 SNRNP35Q16560 246 aaKnown RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 LY6KQ17RY6 165 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 ZNF569Q5MCW4 686 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 C10orf76Q5T2E6 689 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 IER5Q5VY09 327 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 EEPD1Q7L9B9 569 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 TRMT1LQ7Z2T5 733 aaKnown RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 MTERF4Q7Z6M4 381 aaKnown RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 PLEKHH3Q7Z736 793 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 RASAL3Q86YV0 1011 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 GPD1LQ8N335 351 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 SECISBP2LQ93073 1101 aaKnown RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 FAM81BQ96LP2 452 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 PCYT2Q99447 389 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 SH2D3AQ9BRG2 576 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 CBWD1Q9BRT8 395 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 TMEM134Q9H6X4 195 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 APEX2Q9UBZ4 518 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 TSKSQ9UJT2 592 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 REXO2Q9Y3B8 237 aaKnown RBP11.36□□□□□ -0.59
CALD1-211ENST00000445569 FHOD1Q9Y613 1164 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 COL1A2P08123 1366 aa11.36□□□□□ -0.59
CALD1-211ENST00000445569 RBM47A0AV96 593 aaKnown RBP11.35□□□□□ -0.59
CALD1-211ENST00000445569 SLC15A5A6NIM6 579 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 HBP1O60381 514 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 LDHAP00338 332 aaKnown RBP11.35□□□□□ -0.59
CALD1-211ENST00000445569 TRIM49P0CI25 452 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 TRIM49CP0CI26 452 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 TUBB4BP68371 445 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 MAMDC4Q6UXC1 1216 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 GPR142Q7Z601 462 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
CALD1-211ENST00000445569 TRIM58Q8NG06 486 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 PSPC1Q8WXF1 523 aaKnown RBP11.35□□□□□ -0.59
CALD1-211ENST00000445569 POMGNT1Q8WZA1 660 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 EMID1Q96A84 441 aaPredicted RBP11.35□□□□□ -0.59
CALD1-211ENST00000445569 FBXL18Q96ME1 805 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 KIFC3Q9BVG8 833 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 SIX2Q9NPC8 291 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.35□□□□□ -0.59
CALD1-211ENST00000445569 ERAP1Q9NZ08 941 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 ZNF215Q9UL58 517 aaPredicted RBP11.35□□□□□ -0.59
CALD1-211ENST00000445569 MRFAP1Q9Y605 127 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 ADGRA3Q8IWK6 1321 aa11.35□□□□□ -0.59
CALD1-211ENST00000445569 PJA2O43164 708 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 EXTL3O43909 919 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 TACC1O75410 805 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 CAPN15O75808 1086 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 SLC9A1P19634 815 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 ATP4AP20648 1035 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 GLRA2P23416 452 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 JAM2P57087 298 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
CALD1-211ENST00000445569 SLC18A3Q16572 532 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 WHAMMP3Q1A5X7 153 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 EPC2Q52LR7 807 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 ZNF484Q5JVG2 852 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 ZPBP2Q6X784 338 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 DPP9Q86TI2 863 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 SLC35F6Q8N357 371 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 PPTC7Q8NI37 304 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 ASAP3Q8TDY4 903 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 WDR24Q96S15 920 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 CEP89Q96ST8 783 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 PCIF1Q9H4Z3 704 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 RNF186Q9NXI6 227 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 SAGE1Q9NXZ1 904 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 TRPC6Q9Y210 931 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 USP20Q9Y2K6 914 aa11.34□□□□□ -0.59
CALD1-211ENST00000445569 PCDHA13Q9Y5I0 950 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms