RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 TSPAN1O60635 241 aa26.45■■□□□ 1.82
C9orf3-207ENST00000445181 LIG1P18858 919 aa26.45■■□□□ 1.82
C9orf3-207ENST00000445181 ME1P48163 572 aa26.45■■□□□ 1.82
C9orf3-207ENST00000445181 KCNQ1P51787 676 aa26.45■■□□□ 1.82
C9orf3-207ENST00000445181 MCM6Q14566 821 aa26.45■■□□□ 1.82
C9orf3-207ENST00000445181 PAN2Q504Q3 1202 aaKnown RBP26.45■■□□□ 1.82
C9orf3-207ENST00000445181 CDCA2Q69YH5 1023 aaPredicted RBP26.45■■□□□ 1.82
C9orf3-207ENST00000445181 GPBP1Q86WP2 473 aa26.45■■□□□ 1.82
C9orf3-207ENST00000445181 CMTR2Q8IYT2 770 aaKnown RBP26.45■■□□□ 1.82
C9orf3-207ENST00000445181 LARP4BQ92615 738 aaKnown RBP26.45■■□□□ 1.82
C9orf3-207ENST00000445181 BLOC1S4Q9NUP1 217 aa26.45■■□□□ 1.82
C9orf3-207ENST00000445181 NLRC5Q86WI3 1866 aa26.45■■□□□ 1.82
C9orf3-207ENST00000445181 CUTAO60888 179 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 KRT18P05783 430 aaKnown RBP26.44■■□□□ 1.82
C9orf3-207ENST00000445181 SKIP12755 728 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 AXLP30530 894 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 GATMP50440 423 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 PEX3P56589 373 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 DMP1Q13316 513 aaPredicted RBP26.44■■□□□ 1.82
C9orf3-207ENST00000445181 TMEM132AQ24JP5 1023 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 LRRC15Q8TF66 581 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 CPB2Q96IY4 423 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 C11orf84Q9BUA3 381 aaPredicted RBP26.44■■□□□ 1.82
C9orf3-207ENST00000445181 KIFC3Q9BVG8 833 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 PANK2Q9BZ23 570 aa26.44■■□□□ 1.82
C9orf3-207ENST00000445181 PRMT7Q9NVM4 692 aaPredicted RBP26.44■■□□□ 1.82
C9orf3-207ENST00000445181 MRPL42Q9Y6G3 142 aaKnown RBP26.44■■□□□ 1.82
C9orf3-207ENST00000445181 RALGAPA2Q2PPJ7 1873 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 NPHP3-ACAD11A0A0J9YXS1 232 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 TBKBP1A7MCY6 615 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 HOXA2O43364 376 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 FGFR1P11362 822 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 HOXA11P31270 313 aaPredicted RBP26.43■■□□□ 1.82
C9orf3-207ENST00000445181 DDIT3P35638 169 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 RAB27AP51159 221 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 KRT85P78386 507 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 NOTUMQ6P988 496 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 CCDC73Q6ZRK6 1079 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 ABI1Q8IZP0 508 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 DAW1Q8N136 415 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 UHRF1Q96T88 793 aaPredicted RBP26.43■■□□□ 1.82
C9orf3-207ENST00000445181 TRAIPQ9BWF2 469 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 FAM105AQ9NUU6 356 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 STK17AQ9UEE5 414 aa26.43■■□□□ 1.82
C9orf3-207ENST00000445181 SFI1A8K8P3 1242 aa26.42■■□□□ 1.82
C9orf3-207ENST00000445181 EOMESO95936 686 aa26.42■■□□□ 1.82
C9orf3-207ENST00000445181 STAT6P42226 847 aa26.42■■□□□ 1.82
C9orf3-207ENST00000445181 EFNA5P52803 228 aa26.42■■□□□ 1.82
C9orf3-207ENST00000445181 CACNB1Q02641 598 aaPredicted RBP26.42■■□□□ 1.82
C9orf3-207ENST00000445181 MAPK6Q16659 721 aa26.42■■□□□ 1.82
C9orf3-207ENST00000445181 TIGD5Q53EQ6 642 aa26.42■■□□□ 1.82
C9orf3-207ENST00000445181 C17orf75Q9HAS0 396 aa26.42■■□□□ 1.82
C9orf3-207ENST00000445181 TNFRSF10AO00220 468 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 GRM6O15303 877 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 B4GALT5O43286 388 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 PRKCBP05771 671 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 NPTX2P47972 431 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 NUCB2P80303 420 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 MAPK7Q13164 816 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 AMHR2Q16671 573 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 LONRF3Q496Y0 759 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 ARSHQ5FYA8 562 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 PDILTQ8N807 584 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 CCDC51Q96ER9 411 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 PRIMPOLQ96LW4 560 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 PLVAPQ9BX97 442 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 KMT5AQ9NQR1 393 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 RCOR1Q9UKL0 485 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 PCDHB2Q9Y5E7 798 aa26.41■■□□□ 1.82
C9orf3-207ENST00000445181 ARF4P18085 180 aaPredicted RBP26.4■■□□□ 1.82
C9orf3-207ENST00000445181 ANP32AP39687 249 aaKnown RBP26.4■■□□□ 1.82
C9orf3-207ENST00000445181 PRPF4BQ13523 1007 aaKnown RBP26.4■■□□□ 1.82
C9orf3-207ENST00000445181 SPOUT1Q5T280 376 aaKnown RBP26.4■■□□□ 1.82
C9orf3-207ENST00000445181 PGBD4Q96DM1 585 aa26.4■■□□□ 1.82
C9orf3-207ENST00000445181 SPATA32Q96LK8 384 aa26.4■■□□□ 1.82
C9orf3-207ENST00000445181 REEP2Q9BRK0 252 aa26.4■■□□□ 1.82
C9orf3-207ENST00000445181 TRIM6Q9C030 488 aaPredicted RBP26.4■■□□□ 1.82
C9orf3-207ENST00000445181 LMAN2LQ9H0V9 348 aa26.4■■□□□ 1.82
C9orf3-207ENST00000445181 FZD8Q9H461 694 aa26.4■■□□□ 1.82
C9orf3-207ENST00000445181 UBE2ZQ9H832 354 aaPredicted RBP26.4■■□□□ 1.82
C9orf3-207ENST00000445181 KCNG1Q9UIX4 513 aa26.4■■□□□ 1.82
C9orf3-207ENST00000445181 PCDHA7Q9UN72 937 aa26.4■■□□□ 1.82
C9orf3-207ENST00000445181 VCANP13611 3396 aa26.4■■□□□ 1.82
C9orf3-207ENST00000445181 TTC28Q96AY4 2481 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.39■■□□□ 1.82
C9orf3-207ENST00000445181 K7ERI5 159 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 PLS3P13797 630 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 SMTNP53814 917 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 TCEAL5Q5H9L2 206 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 PPP4R3CPQ6ZMV5 832 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 SV2BQ7L1I2 683 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 ZNF598Q86UK7 904 aaKnown RBP26.39■■□□□ 1.82
C9orf3-207ENST00000445181 LPPQ93052 612 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 CHAMP1Q96JM3 812 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 NECAB3Q96P71 396 aaPredicted RBP26.39■■□□□ 1.82
C9orf3-207ENST00000445181 TMEM117Q9H0C3 514 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 ZHX3Q9H4I2 956 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 NSUN3Q9H649 340 aaKnown RBP26.39■■□□□ 1.82
C9orf3-207ENST00000445181 ODF2LQ9ULJ1 636 aa26.39■■□□□ 1.82
C9orf3-207ENST00000445181 TBCAO75347 108 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms