RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 MAPK6Q16659 721 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 GAS2L3Q86XJ1 694 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 NELFCDQ8IXH7 590 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 PRIMPOLQ96LW4 560 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 ACCSQ96QU6 501 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 TBX21Q9UL17 535 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 ALPK3Q96L96 1907 aa16.6■□□□□ 0.25
CCNE1-203ENST00000444983 ZNF165P49910 485 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 PAK1Q13153 545 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 IQCB1Q15051 598 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 ANKRD40Q6AI12 368 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 TTI2Q6NXR4 508 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 SLC39A4Q6P5W5 647 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 NELFBQ8WX92 580 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 P2RX5Q93086 422 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 NOC4LQ9BVI4 516 aaKnown RBP16.59■□□□□ 0.25
CCNE1-203ENST00000444983 OSBPL7Q9BZF2 842 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 INO80BQ9C086 356 aaPredicted RBP16.59■□□□□ 0.25
CCNE1-203ENST00000444983 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 TYW1Q9NV66 732 aaKnown RBP16.59■□□□□ 0.25
CCNE1-203ENST00000444983 PRMT7Q9NVM4 692 aaPredicted RBP16.59■□□□□ 0.25
CCNE1-203ENST00000444983 GINS2Q9Y248 185 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 STYXL1Q9Y6J8 313 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 SQORQ9Y6N5 450 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 TRIM49BA6NDI0 452 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 INO80B-WBP1J3KQ70 363 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 SNRPFP62306 86 aaKnown RBP16.59■□□□□ 0.25
CCNE1-203ENST00000444983 LRRC63Q05C16 580 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 MBTPS1Q14703 1052 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 NCAPHQ15003 741 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 KLHL10Q6JEL2 608 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 ZPBP2Q6X784 338 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 ENOX1Q8TC92 643 aaKnown RBP16.59■□□□□ 0.25
CCNE1-203ENST00000444983 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
CCNE1-203ENST00000444983 NAT10Q9H0A0 1025 aaKnown RBP16.59■□□□□ 0.25
CCNE1-203ENST00000444983 CTNND2Q9UQB3 1225 aa16.59■□□□□ 0.25
CCNE1-203ENST00000444983 M0QZ92 97 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 ABLIM1O14639 778 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 PRKCBP05771 671 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 CTSHP09668 335 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 ADSSP30520 456 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 HOXA11P31270 313 aaPredicted RBP16.58■□□□□ 0.24
CCNE1-203ENST00000444983 STRN3Q13033 797 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 BFSP2Q13515 415 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 GPNMBQ14956 572 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 NFIL3Q16649 462 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 EDRF1Q3B7T1 1238 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 FBXO47Q5MNV8 452 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 TSHZ1Q6ZSZ6 1077 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.24
CCNE1-203ENST00000444983 ZC3H3Q8IXZ2 948 aaKnown RBP16.58■□□□□ 0.24
CCNE1-203ENST00000444983 ACO2Q99798 780 aaKnown RBP16.58■□□□□ 0.24
CCNE1-203ENST00000444983 PTPRHQ9HD43 1115 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 EXOC7Q9UPT5 735 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 ATP11BQ9Y2G3 1177 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 USP20Q9Y2K6 914 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 NOC2LQ9Y3T9 749 aaKnown RBP16.58■□□□□ 0.24
CCNE1-203ENST00000444983 CNTNAP2Q9UHC6 1331 aa16.58■□□□□ 0.24
CCNE1-203ENST00000444983 TANC1Q9C0D5 1861 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 TISP43B9A030 160 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 ANKRD63C9JTQ0 380 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 B4GALT5O43286 388 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 TSPAN1O60635 241 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 CLTBP09497 229 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 SELPP16109 830 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 PROZP22891 400 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 FAM228AQ86W67 206 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 C12orf56Q8IXR9 622 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 CCDC155Q8N6L0 562 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 FAM200AQ8TCP9 573 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 SCLT1Q96NL6 688 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 TARS2Q9BW92 718 aaKnown RBP16.57■□□□□ 0.24
CCNE1-203ENST00000444983 MRPL4Q9BYD3 311 aaKnown RBP16.57■□□□□ 0.24
CCNE1-203ENST00000444983 AGO3Q9H9G7 860 aaKnown RBP16.57■□□□□ 0.24
CCNE1-203ENST00000444983 AGPAT3Q9NRZ7 376 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 CGNQ9P2M7 1197 aaKnown RBP16.57■□□□□ 0.24
CCNE1-203ENST00000444983 UMODL1Q5DID0 1318 aa16.57■□□□□ 0.24
CCNE1-203ENST00000444983 A0A1B0GUA9 196 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 BICDL2A1A5D9 508 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 RBAK-RBAKDNI3L0D1 243 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 IKBKBO14920 756 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 HNRNPDLO14979 420 aaKnown RBP16.56■□□□□ 0.24
CCNE1-203ENST00000444983 ARF4P18085 180 aaPredicted RBP16.56■□□□□ 0.24
CCNE1-203ENST00000444983 STX17P56962 302 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 PRPF4BQ13523 1007 aaKnown RBP16.56■□□□□ 0.24
CCNE1-203ENST00000444983 LPIN1Q14693 890 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 LRRC8DQ7L1W4 858 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 SLC9A9Q8IVB4 645 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 SYCP3Q8IZU3 236 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 USP38Q8NB14 1042 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 HAPLN2Q9GZV7 340 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 HSD3B7Q9H2F3 369 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 CBX8Q9HC52 389 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 DMAC2Q9NW81 257 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 TNFSF13BQ9Y275 285 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 TOM1L1O75674 476 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 FGFR4P22455 802 aa16.56■□□□□ 0.24
CCNE1-203ENST00000444983 SFPQP23246 707 aaKnown RBP eCLIP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms