RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ADAMTS19Q8TE59 1207 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 KIFC3Q9BVG8 833 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 EXOC1Q9NV70 894 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 TMEM63CQ9P1W3 806 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 PCDHA5Q9Y5H7 936 aa18.99■□□□□ 0.63
LIME1-202ENST00000444951 MICAL3Q7RTP6 2002 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 A0A087WZ62 844 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 TNFRSF10AO00220 468 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 BIN1O00499 593 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 SLC16A4O15374 487 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 KLRC4O43908 158 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 LPXNO60711 386 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 MYL1P05976 194 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 GAP43P17677 238 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 POU3F3P20264 500 aaPredicted RBP18.98■□□□□ 0.63
LIME1-202ENST00000444951 NPTX2P47972 431 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 GPC3P51654 580 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 TFDP1Q14186 410 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 KMT5BQ4FZB7 885 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 CCDC183Q5T5S1 534 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 CNNM4Q6P4Q7 775 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 NME8Q8N427 588 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 DEPTORQ8TB45 409 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 CCDC47Q96A33 483 aaKnown RBP18.98■□□□□ 0.63
LIME1-202ENST00000444951 NECAB3Q96P71 396 aaPredicted RBP18.98■□□□□ 0.63
LIME1-202ENST00000444951 FDXACB1Q9BRP7 624 aaPredicted RBP18.98■□□□□ 0.63
LIME1-202ENST00000444951 CDHR5Q9HBB8 845 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 KMT5AQ9NQR1 393 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 LARSQ9P2J5 1176 aaKnown RBP18.98■□□□□ 0.63
LIME1-202ENST00000444951 CDY2AQ9Y6F7 541 aa18.98■□□□□ 0.63
LIME1-202ENST00000444951 ASAP2O43150 1006 aa18.97■□□□□ 0.63
LIME1-202ENST00000444951 CSDE1O75534 798 aaKnown RBP18.97■□□□□ 0.63
LIME1-202ENST00000444951 NMT1P30419 496 aaKnown RBP18.97■□□□□ 0.63
LIME1-202ENST00000444951 ZNF131P52739 623 aa18.97■□□□□ 0.63
LIME1-202ENST00000444951 PPP2R5AQ15172 486 aa18.97■□□□□ 0.63
LIME1-202ENST00000444951 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.97■□□□□ 0.63
LIME1-202ENST00000444951 FAM178BQ8IXR5 827 aa18.97■□□□□ 0.63
LIME1-202ENST00000444951 ELOA2Q8IYF1 753 aaPredicted RBP18.97■□□□□ 0.63
LIME1-202ENST00000444951 SYAP1Q96A49 352 aaPredicted RBP18.97■□□□□ 0.63
LIME1-202ENST00000444951 OSMRQ99650 979 aa18.97■□□□□ 0.63
LIME1-202ENST00000444951 MRPL44Q9H9J2 332 aaKnown RBP18.97■□□□□ 0.63
LIME1-202ENST00000444951 TRPV2Q9Y5S1 764 aa18.97■□□□□ 0.63
LIME1-202ENST00000444951 BRWD1Q9NSI6 2320 aa18.97■□□□□ 0.63
LIME1-202ENST00000444951 BDP1A6H8Y1 2624 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 MYH11P35749 1972 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 PVALEFA0A1B0GWK0 134 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 K7ENM7 598 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 GPR32O75388 356 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 PARNO95453 639 aaKnown RBP18.96■□□□□ 0.63
LIME1-202ENST00000444951 CHRNA1P02708 482 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 NAMPTP43490 491 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 PHKA2P46019 1235 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 KCNQ1P51787 676 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 SMTNP53814 917 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 SKIV2LQ15477 1246 aaKnown RBP18.96■□□□□ 0.63
LIME1-202ENST00000444951 FAM117BQ6P1L5 589 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 GDPD5Q8WTR4 605 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 CELF4Q9BZC1 486 aaKnown RBP18.96■□□□□ 0.63
LIME1-202ENST00000444951 ADAMTS10Q9H324 1103 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 SLC39A2Q9NP94 309 aa18.96■□□□□ 0.63
LIME1-202ENST00000444951 ABHD14A-ACY1A0A1B0GW23 586 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 FRMD3A2A2Y4 597 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 GJB5O95377 273 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 FAM26FQ5R3K3 315 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 ZBTB8OSQ8IWT0 167 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 DBF4BQ8NFT6 615 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 UHRF1Q96T88 793 aaPredicted RBP18.95■□□□□ 0.62
LIME1-202ENST00000444951 ZBED2Q9BTP6 218 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 FGFBP2Q9BYJ0 223 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 GCOM2Q9BZD3 368 aaPredicted RBP18.95■□□□□ 0.62
LIME1-202ENST00000444951 C17orf75Q9HAS0 396 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 RMND1Q9NWS8 449 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 KIAA1468Q9P260 1216 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 MAN1B1Q9UKM7 699 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 ADGRA3Q8IWK6 1321 aa18.95■□□□□ 0.62
LIME1-202ENST00000444951 INO80B-WBP1J3KQ70 363 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 GCNT3O95395 438 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 RPLP2P05387 115 aaKnown RBP18.94■□□□□ 0.62
LIME1-202ENST00000444951 BMP1P13497 986 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 FGFR4P22455 802 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 CRYBB1P53674 252 aaPredicted RBP18.94■□□□□ 0.62
LIME1-202ENST00000444951 CDC42EP1Q00587 391 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 IKBKEQ14164 716 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 ZC2HC1CQ53FD0 456 aaPredicted RBP18.94■□□□□ 0.62
LIME1-202ENST00000444951 HAUS6Q7Z4H7 955 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 RPAINQ86UA6 219 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 ZNF410Q86VK4 478 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 GLIS3Q8NEA6 775 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 SPIRE2Q8WWL2 714 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 GSDMAQ96QA5 445 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 INO80BQ9C086 356 aaPredicted RBP18.94■□□□□ 0.62
LIME1-202ENST00000444951 SEL1LQ9UBV2 794 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 MTUS1Q9ULD2 1270 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 SIP14410 1827 aa18.94■□□□□ 0.62
LIME1-202ENST00000444951 DENND3A2RUS2 1198 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 LINC01553A4QN01 128 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 CAND2O75155 1236 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 MYBP10242 640 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 GHRP10912 638 aa18.93■□□□□ 0.62
LIME1-202ENST00000444951 CASP5P51878 434 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms