RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 SFI1A8K8P3 1242 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 B4GALT5O43286 388 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 FGFR1P11362 822 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 PLS3P13797 630 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 FOSL2P15408 326 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 ARF4P18085 180 aaPredicted RBP19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 GATMP50440 423 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 SMTNP53814 917 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 PRPF4BQ13523 1007 aaKnown RBP19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 FAM187BQ17R55 369 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 AXDND1Q5T1B0 1012 aaPredicted RBP19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 SV2BQ7L1I2 683 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 SPRED2Q7Z698 418 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 ZNF598Q86UK7 904 aaKnown RBP19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 PDILTQ8N807 584 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 PGBD4Q96DM1 585 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 REEP2Q9BRK0 252 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 C17orf80Q9BSJ5 609 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 TMEM117Q9H0C3 514 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 FAM13BQ9NYF5 915 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 LARSQ9P2J5 1176 aaKnown RBP19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 RBM19Q9Y4C8 960 aaKnown RBP19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 PCDHB2Q9Y5E7 798 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 CNTNAP2Q9UHC6 1331 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 K7ERI5 159 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 ACKR2O00590 384 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 ZNF623O75123 536 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 TBCAO75347 108 aaKnown RBP19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 FAM13AO94988 1023 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 CACNB1Q02641 598 aaPredicted RBP19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 SHC4Q6S5L8 630 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 TMEM192Q8IY95 271 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 CNNM3Q8NE01 707 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 FBXO22Q8NEZ5 403 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 LEO1Q8WVC0 666 aaPredicted RBP19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 SPIRE2Q8WWL2 714 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 TRIM6Q9C030 488 aaPredicted RBP19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 SCAND2PQ9GZW5 306 aaPredicted RBP19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 CCDC113Q9H0I3 377 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 MRPL42Q9Y6G3 142 aaKnown RBP19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 RALGAPA2Q2PPJ7 1873 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 FNDC1Q4ZHG4 1894 aaPredicted RBP19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 NLRC5Q86WI3 1866 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 TRANK1O15050 2925 aa19.24■□□□□ 0.67
SMARCAL1-209ENST00000444508 CDH23Q9H251 3354 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 A0A087X0B3 334 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 ATF7P17544 494 aaPredicted RBP19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 CTNNB1P35222 781 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 EPC2Q52LR7 807 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 NAALADL2Q58DX5 795 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 UBXN11Q5T124 520 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 SPOUT1Q5T280 376 aaKnown RBP19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 SLC27A1Q6PCB7 646 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 HELQQ8TDG4 1101 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 RSPH1Q8WYR4 309 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 ZHX3Q9H4I2 956 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 PARVGQ9HBI0 331 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 STXBP5LQ9Y2K9 1186 aa19.23■□□□□ 0.67
SMARCAL1-209ENST00000444508 A0A1B0GUA9 196 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 EPOPA6NHQ4 379 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 H0YCG3 227 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 N4BP3O15049 544 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 SLC16A4O15374 487 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 GIT2Q14161 759 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 LONRF3Q496Y0 759 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 CLLU1OSQ5K130 101 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 RESP18Q5W5W9 173 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 GLB1LQ6UWU2 654 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 MRPL10Q7Z7H8 261 aaKnown RBP19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 HACE1Q8IYU2 909 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 LRRC43Q8N309 656 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 MYCT1Q8N699 235 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 IQUBQ8NA54 791 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 CLP1Q92989 425 aaKnown RBP19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 LPPQ93052 612 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 CHAMP1Q96JM3 812 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 NTPCRQ9BSD7 190 aaKnown RBP19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 EIF2AQ9BY44 585 aaKnown RBP19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 MRPL9Q9BYD2 267 aaKnown RBP19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 CUEDC2Q9H467 287 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 TMEM134Q9H6X4 195 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 RNF19AQ9NV58 838 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 ARHGAP28Q9P2N2 729 aa19.22■□□□□ 0.67
SMARCAL1-209ENST00000444508 RFXAPO00287 272 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 GTPBP6O43824 516 aaPredicted RBP19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 SLC34A2O95436 690 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 NPTXRO95502 500 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 ITGA4P13612 1032 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 IGFBP4P22692 258 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 BMPR1AP36894 532 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 STRN3Q13033 797 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 DYMQ7RTS9 669 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 APBB1IPQ7Z5R6 666 aaPredicted RBP19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 CDR2LQ86X02 465 aaPredicted RBP19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 GDPD5Q8WTR4 605 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 DHX58Q96C10 678 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 CASD1Q96PB1 797 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 PYM1Q9BRP8 204 aaKnown RBP19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 ADPGKQ9BRR6 497 aa19.21■□□□□ 0.67
SMARCAL1-209ENST00000444508 LRRC27Q9C0I9 530 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms