RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 KCNC3Q14003 757 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 MRPL10Q7Z7H8 261 aaKnown RBP12.09□□□□□ -0.47
SF3A1-203ENST00000444440 ZNF280BQ86YH2 543 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 EXOC8Q8IYI6 725 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 EFHBQ8N7U6 833 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 VN1R3Q9BXE9 311 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 RAPGEFL1Q9UHV5 662 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 HES2Q9Y543 173 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 INO80B-WBP1J3KQ70 363 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 ST18O60284 1047 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 ZC3H11AO75152 810 aaKnown RBP eCLIP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 ARF4P18085 180 aaPredicted RBP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 CDC25AP30304 524 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 TRAPPC10P48553 1259 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 SLC11A1P49279 550 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 NDUFV1P49821 464 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.481e-6■■□□□ 12.7
SF3A1-203ENST00000444440 RAB27AP51159 221 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 ZP2Q05996 745 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 GNL2Q13823 731 aaKnown RBP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 MXD4Q14582 209 aaPredicted RBP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 DUSP6Q16828 381 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 NOMO2Q5JPE7 1267 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 FEZF2Q8TBJ5 459 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 AUTS2Q8WXX7 1259 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 TCF25Q9BQ70 676 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 GBP3Q9H0R5 595 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 NXF3Q9H4D5 531 aaKnown RBP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 TLE6Q9H808 572 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 C11orf16Q9NQ32 467 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 MIOSQ9NXC5 875 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 SPG21Q9NZD8 308 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 CDH22Q9UJ99 828 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 DBR1Q9UK59 544 aaKnown RBP12.08□□□□□ -0.48
SF3A1-203ENST00000444440 LZTS1Q9Y250 596 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 USP20Q9Y2K6 914 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 IPPQ9Y573 584 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
SF3A1-203ENST00000444440 F8W810 466 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 GALTP07902 379 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 NCLP19338 710 aaKnown RBP12.07□□□□□ -0.48
SF3A1-203ENST00000444440 POU5F1BQ06416 359 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 SMAD4Q13485 552 aaKnown RBP12.07□□□□□ -0.48
SF3A1-203ENST00000444440 SMAD2Q15796 467 aaKnown RBP12.07□□□□□ -0.48
SF3A1-203ENST00000444440 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 GLB1LQ6UWU2 654 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 KCNK18Q7Z418 384 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 IGSF22Q8N9C0 903 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 SMRP1Q8NCR6 262 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 CCDC43Q96MW1 224 aaKnown RBP12.07□□□□□ -0.48
SF3A1-203ENST00000444440 NACC1Q96RE7 527 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 MRPL9Q9BYD2 267 aaKnown RBP12.07□□□□□ -0.48
SF3A1-203ENST00000444440 NFKBIZQ9BYH8 718 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 CXCL16Q9H2A7 254 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 RSAD1Q9HA92 442 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 ENTPD7Q9NQZ7 604 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 CD207Q9UJ71 328 aa12.07□□□□□ -0.48
SF3A1-203ENST00000444440 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
SF3A1-203ENST00000444440 LRRIQ4A6NIV6 560 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 NCK2O43639 380 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 ERLIN2O94905 339 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 EYA4O95677 639 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 POMCP01189 267 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 PPM1AP35813 382 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 CCT6AP40227 531 aaKnown RBP12.06□□□□□ -0.48
SF3A1-203ENST00000444440 COASYQ13057 564 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 TFDP1Q14186 410 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 PUS10Q3MIT2 529 aaKnown RBP12.06□□□□□ -0.48
SF3A1-203ENST00000444440 CDCA2Q69YH5 1023 aaPredicted RBP12.06□□□□□ -0.48
SF3A1-203ENST00000444440 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 GJD3Q8N144 294 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 IGSF21Q96ID5 467 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 ZFP42Q96MM3 310 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 KIFC3Q9BVG8 833 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 APOL6Q9BWW8 343 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 ZBP1Q9H171 429 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 CSRNP2Q9H175 543 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 LRWD1Q9UFC0 647 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 TECTAO75443 2155 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 KMT2EQ8IZD2 1858 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 DOCK8Q8NF50 2099 aa12.06□□□□□ -0.48
SF3A1-203ENST00000444440 ARHGEF35A5YM69 484 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 FAM86C2PA6NEL3 165 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 C2orf71A6NGG8 1288 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 ARL5CA6NH57 179 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 E9PMD0 336 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 NPTXRO95502 500 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 SKIP12755 728 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 CYP11B2P19099 503 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 AXLP30530 894 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 MLH1P40692 756 aa12.05□□□□□ -0.48
SF3A1-203ENST00000444440 ALDH7A1P49419 539 aaKnown RBP12.05□□□□□ -0.48
SF3A1-203ENST00000444440 MCM2P49736 904 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms