RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 LNX1Q8TBB1 728 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 ACTRT1Q8TDG2 376 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 KCTD10Q9H3F6 313 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 GPRC5CQ9NQ84 441 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 EIF2AK2P19525 551 aaKnown RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SMTNP53814 917 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 KRT17Q04695 432 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 BYSLQ13895 437 aaKnown RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SPRED3Q2MJR0 410 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 PADI6Q6TGC4 694 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SYT2Q8N9I0 419 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 STAMBPL1Q96FJ0 436 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 IFT74Q96LB3 600 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 STK33Q9BYT3 514 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 ABCF3Q9NUQ8 709 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SUCLA2Q9P2R7 463 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 MYO3BQ8WXR4 1341 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SGPL1O95470 568 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 ECE1P42892 770 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 RPL21P46778 160 aaKnown RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 DLG4P78352 724 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SEMA3FQ13275 785 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 HHATQ5VTY9 493 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 LRIG3Q6UXM1 1119 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 PRPF38AQ8NAV1 312 aaKnown RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 CPA5Q8WXQ8 436 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 CBWD1Q9BRT8 395 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 PABPC3Q9H361 631 aaKnown RBP12.5□□□□□ -0.41
HCFC1-203ENST00000444191 EHMT1Q9H9B1 1298 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 ETNK1Q9HBU6 452 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 TAF1P21675 1872 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 DDTLA6NHG4 134 aaPredicted RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 UBOX5O94941 541 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 EPHA7Q15375 998 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 TRPM8Q7Z2W7 1104 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 DHX38Q92620 1227 aaKnown RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 NACC1Q96RE7 527 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 NOD2Q9HC29 1040 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 DCTN4Q9UJW0 460 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 MYH7P12883 1935 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 TCRBV7S2A1N4TA0A589 114 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 GOLGA8RI6L899 631 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 HNRNPDLO14979 420 aaKnown RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 UPP2O95045 317 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 PDHA1P08559 390 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 VAMP7P51809 220 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 SLC12A3P55017 1021 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 RWDD2BP57060 319 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 ADCY2Q08462 1091 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 MAPK7Q13164 816 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 SLC10A5Q5PT55 438 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 ZNF526Q8TF50 670 aaPredicted RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 ACSF2Q96CM8 615 aaPredicted RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 CCDC17Q96LX7 622 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 TGS1Q96RS0 853 aaKnown RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 PI4KBQ9UBF8 816 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 PARP2Q9UGN5 583 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 RASA4BC9J798 803 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 RASA4O43374 803 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 FOSP01100 380 aaPredicted RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 PYGMP11217 842 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 GAP43P17677 238 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 CD58P19256 250 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 STAT2P52630 851 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 SMAD1Q15797 465 aaKnown RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 NSMCE1Q8WV22 266 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 KIFAP3Q92845 792 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 CALR3Q96L12 384 aaKnown RBP12.49□□□□□ -0.41
HCFC1-203ENST00000444191 C11orf70Q9BRQ4 267 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 TEKT3Q9BXF9 490 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 PITPNM3Q9BZ71 974 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 TRIM7Q9C029 511 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 TRIM33Q9UPN9 1127 aa12.49□□□□□ -0.41
HCFC1-203ENST00000444191 BBOX1O75936 387 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 EYA4O95677 639 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 CREB1P16220 341 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 SHMT1P34896 483 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 FAM182AQ5T1J6 154 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 DCUN1D2Q6PH85 259 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 C4orf33Q8N1A6 199 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 SCFD2Q8WU76 684 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 RUBCNQ92622 972 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 SYNCQ9H7C4 482 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 AGPAT3Q9NRZ7 376 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 USP21Q9UK80 565 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 IPO5O00410 1097 aaKnown RBP12.48□□□□□ -0.41
HCFC1-203ENST00000444191 FSBPO95073 299 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 CA4P22748 312 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 NPEPPSP55786 919 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 SOX10P56693 466 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 BFSP1Q12934 665 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 ZCWPW2Q504Y3 356 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
HCFC1-203ENST00000444191 LLGL2Q6P1M3 1020 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 RHOT2Q8IXI1 618 aa12.48□□□□□ -0.41
HCFC1-203ENST00000444191 KLF6Q99612 283 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms