RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 TAS1R3Q7RTX0 852 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 XXYLT1Q8NBI6 393 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 LMBR1Q8WVP7 490 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 POMGNT1Q8WZA1 660 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 MAP7D2Q96T17 732 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 KATNAL1Q9BW62 490 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 C2orf40Q9H1Z8 148 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 SETD4Q9NVD3 440 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 SAGE1Q9NXZ1 904 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 AKT3Q9Y243 479 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 THSD7BQ9C0I4 1608 aa10.39□□□□□ -0.75
SMPD4P1-203ENST00000443839 NRCAMQ92823 1304 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 RRN3P2A6NIE6 340 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 AKR1B15C9JRZ8 316 aaPredicted RBP10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 ANKRD63C9JTQ0 380 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 ASAP2O43150 1006 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 PGK1P00558 417 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 SMIM10L2AP0DMW4 78 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 SMIM10L2BP0DMW5 78 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 RBL2Q08999 1139 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 GOLGA8FQ08AF8 430 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 GOLGA8DPQ0D2H9 430 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZNF296Q8WUU4 475 aaPredicted RBP10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 TMEM174Q8WUU8 243 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 KAT2BQ92831 832 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 ERGIC2Q96RQ1 377 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 BEGAINQ9BUH8 593 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 TMEM134Q9H6X4 195 aa10.38□□□□□ -0.75
SMPD4P1-203ENST00000443839 KPNA6O60684 536 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 AFPP02771 609 aaKnown RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 GYPCP04921 128 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 KRT13P13646 458 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 CCND3P30281 292 aaPredicted RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 ADSSP30520 456 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 CASP14P31944 242 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 PSEN2P49810 448 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 ADKP55263 362 aaKnown RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 GJA9P57773 515 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 KCNH2Q12809 1159 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 MAPK6Q16659 721 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 CDCA2Q69YH5 1023 aaPredicted RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 CNGA4Q8IV77 575 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 KCNN1Q92952 543 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZNF668Q96K58 619 aaPredicted RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 SCLT1Q96NL6 688 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 XPNPEP3Q9NQH7 507 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 USP20Q9Y2K6 914 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 MYADML2A6NDP7 307 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 INO80B-WBP1J3KQ70 363 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 ZEB2O60315 1214 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 VTNP04004 478 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 SKILP12757 684 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 MATR3P43243 847 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 PHKA2P46019 1235 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 KLK7P49862 253 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 TERF1P54274 439 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 PURAQ00577 322 aaKnown RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 SNRNP35Q16560 246 aaKnown RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 MARCH8Q5T0T0 291 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 NFRKBQ6P4R8 1299 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 SLC39A4Q6P5W5 647 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 INTS8Q75QN2 995 aaKnown RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 PPP1R13LQ8WUF5 828 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 SLC35C1Q96A29 364 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 SAAL1Q96ER3 474 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 BORCS6Q96GS4 357 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 PPP1R16BQ96T49 567 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 NUP58Q9BVL2 599 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 TARS2Q9BW92 718 aaKnown RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 MRPL4Q9BYD3 311 aaKnown RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 INO80BQ9C086 356 aaPredicted RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 MMRN2Q9H8L6 949 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 FAM207AQ9NSI2 230 aaPredicted RBP10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 ANKFY1Q9P2R3 1169 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 SIP14410 1827 aa10.37□□□□□ -0.75
SMPD4P1-203ENST00000443839 GOLGA8IPA6NC78 632 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 GOLGA8JA6NMD2 632 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 MFAP3LO75121 409 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 PIGRP01833 764 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 PRKCBP05771 671 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 GARTP22102 1010 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 FXR1P51114 621 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 BFSP1Q12934 665 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 SLFN12LQ6IEE8 588 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 LINC01465Q8N7H1 131 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 C7orf31Q8N865 590 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 TC2NQ8N9U0 490 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 CCDC112Q8NEF3 446 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 PXYLP1Q8TE99 480 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 NLRP7Q8WX94 980 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 CRACR2AQ9BSW2 395 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 UPF3AQ9H1J1 476 aaKnown RBP10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 TSKSQ9UJT2 592 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 TTC26A0AVF1 554 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 HAS3O00219 553 aa10.36□□□□□ -0.75
SMPD4P1-203ENST00000443839 MSCO60682 206 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms