RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 PANK2Q9BZ23 570 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 TNMDQ9H2S6 317 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 FZD8Q9H461 694 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 TMEM134Q9H6X4 195 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 PARVGQ9HBI0 331 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 FAM105AQ9NUU6 356 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 RWDD3Q9Y3V2 267 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 CNTNAP2Q9UHC6 1331 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 ACKR2O00590 384 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 N4BP3O15049 544 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 ZNF623O75123 536 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 MYOGP15173 224 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 IBSPP21815 317 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-211ENST00000443563 CMA1P23946 247 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 HOXA11P31270 313 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-211ENST00000443563 ZNF131P52739 623 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 TAP1Q03518 808 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 PRPF4BQ13523 1007 aaKnown RBP11.94□□□□□ -0.5
HDAC6-211ENST00000443563 GIT2Q14161 759 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-211ENST00000443563 AMHR2Q16671 573 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 CSPP1Q1MSJ5 1256 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 NAALADL2Q58DX5 795 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 SLC27A1Q6PCB7 646 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 LRRC15Q8TF66 581 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 TGS1Q96RS0 853 aaKnown RBP11.94□□□□□ -0.5
HDAC6-211ENST00000443563 ADPGKQ9BRR6 497 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 TRIM6Q9C030 488 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-211ENST00000443563 CCDC113Q9H0I3 377 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 POLD4Q9HCU8 107 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 UBN1Q9NPG3 1134 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 CHMP5Q9NZZ3 219 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 SEL1LQ9UBV2 794 aa11.94□□□□□ -0.5
HDAC6-211ENST00000443563 NPHP3-ACAD11A0A0J9YXS1 232 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 A0A1B0GUA9 196 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 LCHNA4D1U4 455 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 LINC01553A4QN01 128 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 SFI1A8K8P3 1242 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 POLR2DO15514 142 aaKnown RBP11.93□□□□□ -0.5
HDAC6-211ENST00000443563 GAP43P17677 238 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 ARF4P18085 180 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-211ENST00000443563 STRN3Q13033 797 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 ZNF598Q86UK7 904 aaKnown RBP11.93□□□□□ -0.5
HDAC6-211ENST00000443563 CEP57L1Q8IYX8 460 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 MYCT1Q8N699 235 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 RNF169Q8NCN4 708 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 DDX12PQ92771 950 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 DHX58Q96C10 678 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 CPB2Q96IY4 423 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 MRPL9Q9BYD2 267 aaKnown RBP11.93□□□□□ -0.5
HDAC6-211ENST00000443563 MRPL4Q9BYD3 311 aaKnown RBP11.93□□□□□ -0.5
HDAC6-211ENST00000443563 TMEM117Q9H0C3 514 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 TTYH1Q9H313 450 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-211ENST00000443563 ZHX3Q9H4I2 956 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 RC3H2Q9HBD1 1191 aaKnown RBP11.93□□□□□ -0.5
HDAC6-211ENST00000443563 ARHGAP28Q9P2N2 729 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 USP25Q9UHP3 1055 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 KCNH3Q9ULD8 1083 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 PCDHB2Q9Y5E7 798 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 CDH23Q9H251 3354 aa11.93□□□□□ -0.5
HDAC6-211ENST00000443563 A0A087X0B3 334 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 A0A1W2PQ27 194 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 A0A1W2PQ64 194 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 A0A1W2PQD8 194 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 CARNS1A5YM72 827 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 MYMKA6NI61 221 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 TBKBP1A7MCY6 615 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 SLC16A4O15374 487 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 TRAK2O60296 914 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 MAPTP10636 758 aaKnown RBP11.92□□□□□ -0.5
HDAC6-211ENST00000443563 LIG1P18858 919 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 NCKAP1LP55160 1127 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 ERVK-21P61565 698 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-211ENST00000443563 E2F4Q16254 413 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 DCAF4L1Q3SXM0 396 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 GLB1LQ6UWU2 654 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 Q7L0L9 218 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 DYMQ7RTS9 669 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 MRPL10Q7Z7H8 261 aaKnown RBP11.92□□□□□ -0.5
HDAC6-211ENST00000443563 FAM178BQ8IXR5 827 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 KCNN1Q92952 543 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 CLP1Q92989 425 aaKnown RBP11.92□□□□□ -0.5
HDAC6-211ENST00000443563 FAM161BQ96MY7 647 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 GAS2L1Q99501 681 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-211ENST00000443563 KIFC3Q9BVG8 833 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 AAASQ9NRG9 546 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 KBTBD4Q9NVX7 518 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 MTMR10Q9NXD2 777 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 KIAA1671Q9BY89 1806 aa11.92□□□□□ -0.5
HDAC6-211ENST00000443563 B4GALT5O43286 388 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 RB1P06400 928 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 FGFR1P11362 822 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 ITGA4P13612 1032 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 PAN2Q504Q3 1202 aaKnown RBP11.91□□□□□ -0.5
HDAC6-211ENST00000443563 UBXN11Q5T124 520 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 SPOUT1Q5T280 376 aaKnown RBP11.91□□□□□ -0.5
HDAC6-211ENST00000443563 ATF7IP2Q5U623 682 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms