RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ENTPD7Q9NQZ7 604 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 FAM105AQ9NUU6 356 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 INPP5FQ9Y2H2 1132 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 PER2O15055 1255 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 DGAT1O75907 488 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 RFX1P22670 979 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 TECP42680 631 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 RAB27AP51159 221 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 NUCB2P80303 420 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 DLX2Q07687 328 aaPredicted RBP9.73□□□□□ -0.85
USP6NL-203ENST00000443016 TFDP1Q14186 410 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 ZNF174Q15697 407 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 CTC1Q2NKJ3 1217 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 CLLU1OSQ5K130 101 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 LRRC55Q6ZSA7 311 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 TMC7Q7Z402 723 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 SRGAP1Q7Z6B7 1085 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 FERMT3Q86UX7 667 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 FAM178BQ8IXR5 827 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 LPPQ93052 612 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 PGBD4Q96DM1 585 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 MTMR9Q96QG7 549 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 TCF25Q9BQ70 676 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 TMEM60Q9H2L4 133 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 AGPAT5Q9NUQ2 364 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 SPG21Q9NZD8 308 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 NOL7Q9UMY1 257 aaKnown RBP9.73□□□□□ -0.85
USP6NL-203ENST00000443016 PCDHGC5Q9Y5F6 944 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 H3BQV1 296 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 INO80B-WBP1J3KQ70 363 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 LINC01565O15544 149 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 ZC3H11AO75152 810 aaKnown RBP eCLIP9.73□□□□□ -0.85
USP6NL-203ENST00000443016 LTBRP36941 435 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 COL19A1Q14993 1142 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 PLPP4Q5VZY2 271 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 ZNF598Q86UK7 904 aaKnown RBP9.73□□□□□ -0.85
USP6NL-203ENST00000443016 NOSTRINQ8IVI9 506 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 TMEM87AQ8NBN3 555 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 ERMNQ8TAM6 284 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 MRPS27Q92552 414 aaKnown RBP9.73□□□□□ -0.85
USP6NL-203ENST00000443016 TMEM169Q96HH4 297 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 C1QTNF1Q9BXJ1 281 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 ANKEF1Q9NU02 776 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 CHMP5Q9NZZ3 219 aa9.73□□□□□ -0.85
USP6NL-203ENST00000443016 A0A087WWV3 80 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 USO1O60763 962 aaKnown RBP9.72□□□□□ -0.85
USP6NL-203ENST00000443016 TBX10O75333 385 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 LYPLA2O95372 231 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 OR52Z1P0C646 297 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 ATF7P17544 494 aaPredicted RBP9.72□□□□□ -0.85
USP6NL-203ENST00000443016 RARRES1P49788 294 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 ERVFC1P60507 584 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 PLCB3Q01970 1234 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 ADAM15Q13444 863 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 BMS1Q14692 1282 aaKnown RBP9.72□□□□□ -0.85
USP6NL-203ENST00000443016 LARP1BQ659C4 914 aaKnown RBP9.72□□□□□ -0.85
USP6NL-203ENST00000443016 PDE12Q6L8Q7 609 aaKnown RBP9.72□□□□□ -0.85
USP6NL-203ENST00000443016 MAEAQ7L5Y9 396 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 EFHBQ8N7U6 833 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 GBP3Q9H0R5 595 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 MINDY3Q9H8M7 445 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 RNF19AQ9NV58 838 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 CD207Q9UJ71 328 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 LZTS1Q9Y250 596 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 PCDHB2Q9Y5E7 798 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 FSD2A1L4K1 749 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 NT5C1B-RDH14C9J2C7 533 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 TTC38Q5R3I4 469 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 SREK1Q8WXA9 508 aaKnown RBP9.72□□□□□ -0.85
USP6NL-203ENST00000443016 RSPH1Q8WYR4 309 aa9.72□□□□□ -0.85
USP6NL-203ENST00000443016 NGRNQ9NPE2 291 aaKnown RBP9.72□□□□□ -0.85
USP6NL-203ENST00000443016 BARX2Q9UMQ3 279 aaPredicted RBP9.72□□□□□ -0.85
USP6NL-203ENST00000443016 FNDC1Q4ZHG4 1894 aaPredicted RBP9.71□□□□□ -0.85
USP6NL-203ENST00000443016 VPS37CA5D8V6 355 aaPredicted RBP9.71□□□□□ -0.85
USP6NL-203ENST00000443016 ZNF623O75123 536 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 SRGAP2BP0DMP2 458 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 BCAR1P56945 870 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 ORC2Q13416 577 aaPredicted RBP9.71□□□□□ -0.85
USP6NL-203ENST00000443016 NOMO2Q5JPE7 1267 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 MCTP1Q6DN14 999 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 CATSPER3Q86XQ3 398 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 URGCPQ8TCY9 931 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 FAM193BQ96PV7 902 aaPredicted RBP9.71□□□□□ -0.85
USP6NL-203ENST00000443016 NACC1Q96RE7 527 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 TRIM6Q9C030 488 aaPredicted RBP9.71□□□□□ -0.85
USP6NL-203ENST00000443016 EPHX3Q9H6B9 360 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 CD320Q9NPF0 282 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 XPNPEP1Q9NQW7 623 aa9.71□□□□□ -0.85
USP6NL-203ENST00000443016 MEIS3P2A8K0S8 358 aa9.71□□□□□ -0.86
USP6NL-203ENST00000443016 STX6O43752 255 aa9.71□□□□□ -0.86
USP6NL-203ENST00000443016 XRCC6P12956 609 aaKnown RBP eCLIP9.71□□□□□ -0.86
USP6NL-203ENST00000443016 TRAPPC10P48553 1259 aa9.71□□□□□ -0.86
USP6NL-203ENST00000443016 PTENP60484 403 aa9.71□□□□□ -0.86
USP6NL-203ENST00000443016 SMAD4Q13485 552 aaKnown RBP9.71□□□□□ -0.86
USP6NL-203ENST00000443016 PCBP1Q15365 356 aaKnown RBP eCLIP9.71□□□□□ -0.86
USP6NL-203ENST00000443016 HAUS3Q68CZ6 603 aa9.71□□□□□ -0.86
USP6NL-203ENST00000443016 POP1Q99575 1024 aaKnown RBP9.71□□□□□ -0.86
USP6NL-203ENST00000443016 CDCA3Q99618 268 aaPredicted RBP9.71□□□□□ -0.86
USP6NL-203ENST00000443016 RSAD1Q9HA92 442 aa9.71□□□□□ -0.86
USP6NL-203ENST00000443016 TUFT1Q9NNX1 390 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms