RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 RSAD1Q9HA92 442 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 TBC1D13Q9NVG8 400 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.31■■□□□ 1.32
CDKN3-204ENST00000442975 E9PMD0 336 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 K7ELQ4 463 aaPredicted RBP23.31■■□□□ 1.32
CDKN3-204ENST00000442975 ARF4P18085 180 aaPredicted RBP23.31■■□□□ 1.32
CDKN3-204ENST00000442975 GTF2F1P35269 517 aaKnown RBP eCLIP23.31■■□□□ 1.32
CDKN3-204ENST00000442975 TMEM132AQ24JP5 1023 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 PLPP4Q5VZY2 271 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 RBM23Q86U06 439 aaKnown RBP23.31■■□□□ 1.32
CDKN3-204ENST00000442975 DEPTORQ8TB45 409 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 RSPH1Q8WYR4 309 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 KIFC3Q9BVG8 833 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 APOL6Q9BWW8 343 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 POLD4Q9HCU8 107 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 ENTPD7Q9NQZ7 604 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 SPG21Q9NZD8 308 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 PUF60Q9UHX1 559 aaKnown RBP23.31■■□□□ 1.32
CDKN3-204ENST00000442975 DNM3Q9UQ16 869 aa23.31■■□□□ 1.32
CDKN3-204ENST00000442975 NCK2O43639 380 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 OFD1O75665 1012 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 NRIP1P48552 1158 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 ALDH7A1P49419 539 aaKnown RBP23.3■■□□□ 1.32
CDKN3-204ENST00000442975 BCAR1P56945 870 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 LEXMQ3ZCV2 418 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 CDCA2Q69YH5 1023 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-204ENST00000442975 AGMOQ6ZNB7 445 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 CDR2LQ86X02 465 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-204ENST00000442975 MRPS27Q92552 414 aaKnown RBP23.3■■□□□ 1.32
CDKN3-204ENST00000442975 CDK5RAP3Q96JB5 506 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 TCF25Q9BQ70 676 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 MMTAG2Q9BU76 263 aaKnown RBP23.3■■□□□ 1.32
CDKN3-204ENST00000442975 CSRNP2Q9H175 543 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 C2orf40Q9H1Z8 148 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 PRMT7Q9NVM4 692 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-204ENST00000442975 HES2Q9Y543 173 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 IPPQ9Y573 584 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 FNDC1Q4ZHG4 1894 aaPredicted RBP23.3■■□□□ 1.32
CDKN3-204ENST00000442975 CNTNAP2Q9UHC6 1331 aa23.3■■□□□ 1.32
CDKN3-204ENST00000442975 NT5C1B-RDH14C9J2C7 533 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 LINC01565O15544 149 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 EYA4O95677 639 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 SSBP05455 408 aaKnown RBP eCLIP23.29■■□□□ 1.32
CDKN3-204ENST00000442975 ITGA4P13612 1032 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 NCLP19338 710 aaKnown RBP23.29■■□□□ 1.32
CDKN3-204ENST00000442975 NAMPTP43490 491 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 PLCB3Q01970 1234 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 KRT17Q04695 432 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 PPP2R5AQ15172 486 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 CLUL1Q15846 466 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 ARL6IP4Q66PJ3 421 aaKnown RBP23.29■■□□□ 1.32
CDKN3-204ENST00000442975 MRPL10Q7Z7H8 261 aaKnown RBP23.29■■□□□ 1.32
CDKN3-204ENST00000442975 SLC39A11Q8N1S5 342 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 SMG8Q8ND04 991 aaKnown RBP23.29■■□□□ 1.32
CDKN3-204ENST00000442975 IFT74Q96LB3 600 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 PLIN2Q99541 437 aa23.29■■□□□ 1.32
CDKN3-204ENST00000442975 NXF3Q9H4D5 531 aaKnown RBP23.29■■□□□ 1.32
CDKN3-204ENST00000442975 NPTXRO95502 500 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 CA8P35219 290 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 MLH1P40692 756 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 NDUFV1P49821 464 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 ERVFC1P60507 584 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 COL19A1Q14993 1142 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 PTCRAQ6ISU1 281 aaPredicted RBP23.28■■□□□ 1.32
CDKN3-204ENST00000442975 KCNK18Q7Z418 384 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 HACE1Q8IYU2 909 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 CNNM3Q8NE01 707 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 KIFAP3Q92845 792 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 TMEM169Q96HH4 297 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 RUSC1Q9BVN2 902 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 TLE6Q9H808 572 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 LZTS1Q9Y250 596 aa23.28■■□□□ 1.32
CDKN3-204ENST00000442975 TNFRSF10AO00220 468 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 TBX10O75333 385 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 BMP15O95972 392 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 POMCP01189 267 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 PRKCBP05771 671 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 SYT1P21579 422 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 AFF1P51825 1210 aaKnown RBP23.27■■□□□ 1.32
CDKN3-204ENST00000442975 MAPK6Q16659 721 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 SLC27A1Q6PCB7 646 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 PPP4R3CPQ6ZMV5 832 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 TMEM173Q86WV6 379 aaPredicted RBP23.27■■□□□ 1.32
CDKN3-204ENST00000442975 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.27■■□□□ 1.32
CDKN3-204ENST00000442975 INTS4Q96HW7 963 aaKnown RBP23.27■■□□□ 1.32
CDKN3-204ENST00000442975 PRIMPOLQ96LW4 560 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 NRDE2Q9H7Z3 1164 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 DNAJB4Q9UDY4 337 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 BRWD1Q9NSI6 2320 aa23.27■■□□□ 1.32
CDKN3-204ENST00000442975 MUC3AQ02505 3323 aa23.26■■□□□ 1.31
CDKN3-204ENST00000442975 PER2O15055 1255 aa23.26■■□□□ 1.31
CDKN3-204ENST00000442975 DLX2Q07687 328 aaPredicted RBP23.26■■□□□ 1.31
CDKN3-204ENST00000442975 PRPF4BQ13523 1007 aaKnown RBP23.26■■□□□ 1.31
CDKN3-204ENST00000442975 SF3A1Q15459 793 aaKnown RBP23.26■■□□□ 1.31
CDKN3-204ENST00000442975 CTC1Q2NKJ3 1217 aa23.26■■□□□ 1.31
CDKN3-204ENST00000442975 TMC7Q7Z402 723 aa23.26■■□□□ 1.31
CDKN3-204ENST00000442975 RASSF8Q8NHQ8 419 aa23.26■■□□□ 1.31
CDKN3-204ENST00000442975 PNMA5Q96PV4 448 aa23.26■■□□□ 1.31
CDKN3-204ENST00000442975 FAM193BQ96PV7 902 aaPredicted RBP23.26■■□□□ 1.31
CDKN3-204ENST00000442975 RNF39Q9H2S5 420 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms