RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 COL4A3BPQ9Y5P4 624 aa9.35□□□□□ -0.91
TOP3B-209ENST00000442653 CPLX1O14810 134 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 GALR2O43603 387 aaPredicted RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 ST18O60284 1047 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 GFRA3O60609 400 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 REC8O95072 547 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 DEXIO95424 95 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 SSBP05455 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 CNPP09543 421 aaKnown RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 SKIP12755 728 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 HOXA11P31270 313 aaPredicted RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 QARSP47897 775 aaKnown RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 RAB27AP51159 221 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 PPP2R5CQ13362 524 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 NONOQ15233 471 aaKnown RBP eCLIP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 LETM2Q2VYF4 491 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 ATAT1Q5SQI0 421 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 UBXN11Q5T124 520 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 MRPL10Q7Z7H8 261 aaKnown RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 ZDHHC14Q8IZN3 488 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 PRPF31Q8WWY3 499 aaKnown RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 RSPH1Q8WYR4 309 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 ATOH1Q92858 354 aaPredicted RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 TMEM143Q96AN5 459 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 INO80BQ9C086 356 aaPredicted RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 BMP2KQ9NSY1 1161 aaPredicted RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 GJB4Q9NTQ9 266 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
TOP3B-209ENST00000442653 EP300Q09472 2414 aaPredicted RBP9.34□□□□□ -0.91
TOP3B-209ENST00000442653 CACNA1AO00555 2505 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 ZBTB39O15060 712 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 LILRB3O75022 631 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 POMCP01189 267 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 SRGAP2CP0DJJ0 459 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 CLCN4P51793 760 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 LAMTOR4Q0VGL1 99 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 STK3Q13188 491 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 GIT2Q14161 759 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 BMS1Q14692 1282 aaKnown RBP9.33□□□□□ -0.92
TOP3B-209ENST00000442653 GALNT17Q6IS24 598 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 GPR149Q86SP6 731 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 CABP7Q86V35 215 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 HAS1Q92839 578 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 ZNF274Q96GC6 653 aaPredicted RBP9.33□□□□□ -0.92
TOP3B-209ENST00000442653 CEP170P1Q96L14 293 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 LXNQ9BS40 222 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 DHX33Q9H6R0 707 aaKnown RBP9.33□□□□□ -0.92
TOP3B-209ENST00000442653 SFXN1Q9H9B4 322 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 RSAD1Q9HA92 442 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 MARCH5Q9NX47 278 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 RGL1Q9NZL6 768 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 CYP46A1Q9Y6A2 500 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 C2orf16Q68DN1 1984 aa9.33□□□□□ -0.92
TOP3B-209ENST00000442653 FAM205CA6NFA0 338 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 F8W810 466 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 N4BP1O75113 896 aaKnown RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 SPIRE1Q08AE8 756 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 EMC2Q15006 297 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 EARS2Q5JPH6 523 aaKnown RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 CWF19L1Q69YN2 538 aaKnown RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 ASTLQ6HA08 431 aaPredicted RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 TAS1R1Q7RTX1 841 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 SRGAP1Q7Z6B7 1085 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 FERMT3Q86UX7 667 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 PPFIBP1Q86W92 1011 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 FAM177A1Q8N128 213 aaPredicted RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 RNF149Q8NC42 400 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 SMG8Q8ND04 991 aaKnown RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 URGCPQ8TCY9 931 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 PSPC1Q8WXF1 523 aaKnown RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 PGBD4Q96DM1 585 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 FAM20AQ96MK3 541 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 KLHL5Q96PQ7 755 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 JPH2Q9BR39 696 aaPredicted RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 PHF20Q9BVI0 1012 aa9.32□□□□□ -0.92
TOP3B-209ENST00000442653 SLKQ9H2G2 1235 aaPredicted RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 PRG3Q9Y2Y8 225 aaPredicted RBP9.32□□□□□ -0.92
TOP3B-209ENST00000442653 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 ARID2Q68CP9 1835 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 CCDC194A0A1B0GVG4 234 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 CARNS1A5YM72 827 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 ARL5CA6NH57 179 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 PROB1E7EW31 1015 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 C2CD2LO14523 706 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 NRP1O14786 923 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 TEX28O15482 410 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 CCNT1O60563 726 aaKnown RBP9.31□□□□□ -0.92
TOP3B-209ENST00000442653 TSPAN1O60635 241 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 EFEMP2O95967 443 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 P4HBP07237 508 aaKnown RBP9.31□□□□□ -0.92
TOP3B-209ENST00000442653 MYBP10242 640 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 NCLP19338 710 aaKnown RBP9.31□□□□□ -0.92
TOP3B-209ENST00000442653 KLRC2P26717 231 aa9.31□□□□□ -0.92
TOP3B-209ENST00000442653 YWHABP31946 246 aaKnown RBP9.31□□□□□ -0.92
TOP3B-209ENST00000442653 MLH1P40692 756 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms