RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TAPT1Q6NXT6 567 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 FIBCD1Q8N539 461 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 MYCT1Q8N699 235 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 ACRBPQ8NEB7 543 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 TMEM169Q96HH4 297 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 RGL1Q9NZL6 768 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 LARSQ9P2J5 1176 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 CDY2AQ9Y6F7 541 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 A6NJR5 290 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 PRPF6O94906 941 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 RHOBTB3O94955 611 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 LCA5LO95447 670 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 TIMP1P01033 207 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 OATP04181 439 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 ITGB5P18084 799 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRIM21P19474 475 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 CTNNB1P35222 781 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 COPB1P53618 953 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 BRD3Q15059 726 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 EPHA7Q15375 998 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 USP6NLQ92738 828 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 CHP1Q99653 195 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 MMTAG2Q9BU76 263 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 LRRC27Q9C0I9 530 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 MAF1Q9H063 256 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 NT5C3AQ9H0P0 336 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 TMEM60Q9H2L4 133 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 ZNF263O14978 683 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 B4GALT4O60513 344 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 HNRNPH3P31942 346 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 ARHGAP1Q07960 439 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 SLC20A2Q08357 652 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 DMP1Q13316 513 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 POTEDQ86YR6 584 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 UBXN4Q92575 508 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 TMEM143Q96AN5 459 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 TIFAQ96CG3 184 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 MYO1AQ9UBC5 1043 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 POLIQ9UNA4 740 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 PCDHB12Q9Y5F1 795 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRPV2Q9Y5S1 764 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 PIK3CDO00329 1044 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 MSH4O15457 936 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 CCDC175P0C221 793 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 ALDH7A1P49419 539 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 AARSP49588 968 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 NPEPPSP55786 919 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 MRPS9P82933 396 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 TUBB2AQ13885 445 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 PLCB4Q15147 1175 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 PLA2G4FQ68DD2 849 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 TMC7Q7Z402 723 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 CABP7Q86V35 215 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 NOA1Q8NC60 698 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 IPO4Q8TEX9 1081 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 TOX2Q96NM4 488 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 GPR20Q99678 358 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 TUBB2BQ9BVA1 445 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 IL23AQ9NPF7 189 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 TMEM51Q9NW97 253 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 CAPN11Q9UMQ6 739 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 POTEMA6NI47 508 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 TBKBP1A7MCY6 615 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 K7ERI5 159 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 LONP1P36776 959 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 KARSQ15046 597 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 MAPK6Q16659 721 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 PTPROQ16827 1216 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 TAF3Q5VWG9 929 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 DPY19L2P1Q6NXN4 242 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 CNNM4Q6P4Q7 775 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 MCPH1Q8NEM0 835 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 PGBD4Q96DM1 585 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 CTAGE1Q96RT6 745 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 CCSER1Q9C0I3 900 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 GDAQ9Y2T3 454 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 LGR5O75473 907 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 YWHABP31946 246 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 HNRNPH2P55795 449 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 OSTNP61366 133 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 ASIC1P78348 528 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 PTPN11Q06124 597 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 PTK7Q13308 1070 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 SMC1AQ14683 1233 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 SHHQ15465 462 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 GDF6Q6KF10 455 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 USP37Q86T82 979 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 SLC35F6Q8N357 371 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 ADAM2Q99965 735 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 BHMT2Q9H2M3 363 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 PIDD1Q9HB75 910 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 PCDH10Q9P2E7 1040 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 ANKFY1Q9P2R3 1169 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRIM10Q9UDY6 481 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 CTNND2Q9UQB3 1225 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 UBIAD1Q9Y5Z9 338 aa8.05□□□□□ -1.12
CDC42BPA-208ENST00000442054 MYH4Q9Y623 1939 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 TTC26A0AVF1 554 aa8.04□□□□□ -1.12
CDC42BPA-208ENST00000442054 LGALS16A8MUM7 142 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms