RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 FNTAP49354 379 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 DRG2P55039 364 aaKnown RBP17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 DLG4P78352 724 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 B3GNT9Q6UX72 402 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 MAEAQ7L5Y9 396 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 ARMC9Q7Z3E5 817 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 CCDC91Q7Z6B0 441 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 NEK9Q8TD19 979 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 SLC20A1Q8WUM9 679 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 PCIF1Q9H4Z3 704 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 CNOT10Q9H9A5 744 aaKnown RBP17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 ZDHHC18Q9NUE0 388 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 SLX4Q8IY92 1834 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 COL11A2P13942 1736 aaPredicted RBP17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 P4HA2O15460 535 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 VAMP7P51809 220 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 PLTPP55058 493 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 GPC5P78333 572 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 SWT1Q5T5J6 900 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 C6orf89Q6UWU4 347 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 COL23A1Q86Y22 540 aaPredicted RBP17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 RIT2Q99578 217 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 RBBP6Q7Z6E9 1792 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 CHRNA3P32297 505 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 ALCAMQ13740 583 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 PABPC3Q9H361 631 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 DDX20Q9UHI6 824 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 SNX24Q9Y343 169 aa17.8■□□□□ 0.44
SEMA3B-207ENST00000441915 DDX39AO00148 427 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 PHF2O75151 1096 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 NUDT17P0C025 328 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 PMS2P54278 862 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 RAPGEF5Q92565 580 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 CABS1Q96KC9 395 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 COL2A1P02458 1487 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 GCLMP48507 274 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 PPP3CAQ08209 521 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 DRP2Q13474 957 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 CCDC121Q6ZUS5 278 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 ARHGEF19Q8IW93 802 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 RPUSD2Q8IZ73 545 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 FBXO25Q8TCJ0 367 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 TLCD1Q96CP7 247 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 C18orf8Q96DM3 657 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 MXRA8Q9BRK3 442 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 TMOD2Q9NZR1 351 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 LOXHD1Q8IVV2 1947 aa17.79■□□□□ 0.44
SEMA3B-207ENST00000441915 PODXLO00592 558 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 KIAA0391O15091 583 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 BYSLQ13895 437 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 TCEAL1Q15170 157 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 DENND2CQ68D51 928 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 AADACL2Q6P093 401 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 MIER3Q7Z3K6 550 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 KRT35Q92764 455 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 ACCSQ96QU6 501 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 ZSWIM1Q9BR11 485 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 BCS1LQ9Y276 419 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 CAND2O75155 1236 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 RTN2O75298 545 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 GBP1P32455 592 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 AOC3Q16853 763 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 SEL1L2Q5TEA6 688 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 RPS6KC1Q96S38 1066 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 VCPKMTQ9H867 229 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 CEP83Q9Y592 693 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 CCDC169A6NNP5 214 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 TMEM110-MUSTN1A8MSY1 372 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 TISP43B9A030 160 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 TCP10L2B9ZVM9 353 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 MYCNP04198 464 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 P4HBP07237 508 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 ACTN3Q08043 901 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 EPC2Q52LR7 807 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 XXYLT1Q8NBI6 393 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 TMEM174Q8WUU8 243 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 CBWD1Q9BRT8 395 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 LRRC4CQ9HCJ2 640 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 PARP2Q9UGN5 583 aa17.78■□□□□ 0.44
SEMA3B-207ENST00000441915 C5orf60A6NFR6 353 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 GGPS1O95749 300 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 GSCP56915 257 aaPredicted RBP17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 MESDQ14696 234 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 TNIP1Q15025 636 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 PLCB4Q15147 1175 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 QPCTQ16769 361 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 KCNV1Q6PIU1 500 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 ZDHHC24Q6UX98 284 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 CPLX4Q7Z7G2 160 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 LDHDQ86WU2 507 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 C12orf56Q8IXR9 622 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 PRELID2Q8N945 189 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 SEC16BQ96JE7 1060 aa17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 MTRF1LQ9UGC7 380 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-207ENST00000441915 PCYOX1Q9UHG3 505 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms