RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 MTHFD1LQ6UB35 978 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 CBWD2Q8IUF1 395 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 CNGA4Q8IV77 575 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 TARS2Q9BW92 718 aaKnown RBP20.85■□□□□ 0.93
SNX17-203ENST00000440760 ABHD10Q9NUJ1 306 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 AGPAT5Q9NUQ2 364 aa20.85■□□□□ 0.93
SNX17-203ENST00000440760 TULP1O00294 542 aaPredicted RBP20.84■□□□□ 0.93
SNX17-203ENST00000440760 DLG4P78352 724 aa20.84■□□□□ 0.93
SNX17-203ENST00000440760 BFSP1Q12934 665 aa20.84■□□□□ 0.93
SNX17-203ENST00000440760 FSCN1Q16658 493 aaKnown RBP20.84■□□□□ 0.93
SNX17-203ENST00000440760 BRDTQ58F21 947 aaPredicted RBP20.84■□□□□ 0.93
SNX17-203ENST00000440760 CDCA2Q69YH5 1023 aaPredicted RBP20.84■□□□□ 0.93
SNX17-203ENST00000440760 LINC01465Q8N7H1 131 aa20.84■□□□□ 0.93
SNX17-203ENST00000440760 RETREG2Q8NC44 543 aa20.84■□□□□ 0.93
SNX17-203ENST00000440760 LMBR1Q8WVP7 490 aa20.84■□□□□ 0.93
SNX17-203ENST00000440760 BAG1Q99933 345 aaPredicted RBP20.84■□□□□ 0.93
SNX17-203ENST00000440760 LSM14BQ9BX40 385 aaKnown RBP20.84■□□□□ 0.93
SNX17-203ENST00000440760 VTNP04004 478 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 C6orf222P0C671 652 aaPredicted RBP20.83■□□□□ 0.93
SNX17-203ENST00000440760 SNRPFP62306 86 aaKnown RBP20.83■□□□□ 0.93
SNX17-203ENST00000440760 MFSD10Q14728 455 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 PLEKHO2Q8TD55 490 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 ZBTB45Q96K62 511 aaPredicted RBP20.83■□□□□ 0.93
SNX17-203ENST00000440760 PANX2Q96RD6 677 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 HAPLN2Q9GZV7 340 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 CCDC113Q9H0I3 377 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 ANKFY1Q9P2R3 1169 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 KCNG1Q9UIX4 513 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 AKT3Q9Y243 479 aa20.83■□□□□ 0.93
SNX17-203ENST00000440760 GPR25O00155 361 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 PGK1P00558 417 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 SMIM10L2AP0DMW4 78 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 SMIM10L2BP0DMW5 78 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 CCND3P30281 292 aaPredicted RBP20.83■□□□□ 0.92
SNX17-203ENST00000440760 GPIHBP1Q8IV16 184 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 CCDC112Q8NEF3 446 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 TMEM174Q8WUU8 243 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 SRRDQ9UH36 339 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 CAPN11Q9UMQ6 739 aa20.83■□□□□ 0.92
SNX17-203ENST00000440760 TRIP12Q14669 1992 aaPredicted RBP20.83■□□□□ 0.92
SNX17-203ENST00000440760 RBAK-RBAKDNI3L0D1 243 aa20.82■□□□□ 0.92
SNX17-203ENST00000440760 DUSP11O75319 330 aaKnown RBP20.82■□□□□ 0.92
SNX17-203ENST00000440760 PRKAR2AP13861 404 aaKnown RBP20.82■□□□□ 0.92
SNX17-203ENST00000440760 PPP2R3AQ06190 1150 aa20.82■□□□□ 0.92
SNX17-203ENST00000440760 SNRNP35Q16560 246 aaKnown RBP20.82■□□□□ 0.92
SNX17-203ENST00000440760 KCNN1Q92952 543 aa20.82■□□□□ 0.92
SNX17-203ENST00000440760 TMEM134Q9H6X4 195 aa20.82■□□□□ 0.92
SNX17-203ENST00000440760 LUC7L2Q9Y383 392 aaKnown RBP20.82■□□□□ 0.92
SNX17-203ENST00000440760 Q9Y3F1 56 aa20.82■□□□□ 0.92
SNX17-203ENST00000440760 MAGEB2O15479 319 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 ZNF500O60304 480 aaPredicted RBP20.81■□□□□ 0.92
SNX17-203ENST00000440760 PRKCBP05771 671 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 ACTN1P12814 892 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 ABCD1P33897 745 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 PSEN2P49810 448 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 HIC1Q14526 733 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 CBWD6Q4V339 395 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 CBWD3Q5JTY5 395 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 CBWD5Q5RIA9 395 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 ZBTB8OSQ8IWT0 167 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 MINDY3Q9H8M7 445 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 SOWAHDA6NJG2 315 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 USP27XA6NNY8 438 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 MSCO60682 206 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 CSDE1O75534 798 aaKnown RBP20.81■□□□□ 0.92
SNX17-203ENST00000440760 PIGRP01833 764 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 HARSP12081 509 aaKnown RBP20.81■□□□□ 0.92
SNX17-203ENST00000440760 KRT13P13646 458 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 SLC9A1P19634 815 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 TFDP1Q14186 410 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 MTF1Q14872 753 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 INTS8Q75QN2 995 aaKnown RBP20.81■□□□□ 0.92
SNX17-203ENST00000440760 NEK11Q8NG66 645 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 FAM213AQ9BRX8 229 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 NUP58Q9BVL2 599 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 TSKSQ9UJT2 592 aa20.81■□□□□ 0.92
SNX17-203ENST00000440760 DNAH12Q6ZR08 3092 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 INO80B-WBP1J3KQ70 363 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 SEPT4O43236 478 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 NRDCO43847 1150 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 NOL4O94818 638 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 GARTP22102 1010 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 FMO5P49326 533 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 VAMP7P51809 220 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 EFNA5P52803 228 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 PURAQ00577 322 aaKnown RBP20.8■□□□□ 0.92
SNX17-203ENST00000440760 FIGNQ5HY92 759 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 C1orf220Q5T0J3 134 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 INO80BQ9C086 356 aaPredicted RBP20.8■□□□□ 0.92
SNX17-203ENST00000440760 GCNT4Q9P109 453 aa20.8■□□□□ 0.92
SNX17-203ENST00000440760 A0A087WZ62 844 aa20.79■□□□□ 0.92
SNX17-203ENST00000440760 B4GALT5O43286 388 aa20.79■□□□□ 0.92
SNX17-203ENST00000440760 MATR3P43243 847 aaKnown RBP eCLIP20.79■□□□□ 0.92
SNX17-203ENST00000440760 NLRP11P59045 1033 aaKnown RBP20.79■□□□□ 0.92
SNX17-203ENST00000440760 ZBTB41Q5SVQ8 909 aa20.79■□□□□ 0.92
SNX17-203ENST00000440760 NFRKBQ6P4R8 1299 aa20.79■□□□□ 0.92
SNX17-203ENST00000440760 GPD1LQ8N335 351 aa20.79■□□□□ 0.92
SNX17-203ENST00000440760 DNAJC7Q99615 494 aa20.79■□□□□ 0.92
SNX17-203ENST00000440760 FDXACB1Q9BRP7 624 aaPredicted RBP20.79■□□□□ 0.92
SNX17-203ENST00000440760 FAM49AQ9H0Q0 323 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms